Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01345 ATGGCCAACCTTGGAGCTAGAACCAATGGAATTTCATCAAACCAAGTTGAGATCCCTATCCATGCAAATGGTGTGGAGTCAAAACCAAGCGAAGAGAGCAACATTGACTACTCACAAAGGGCTCAGTGGCTTAGAGCAGCAGTGTTGGGAGCGAATGATGGGTTAGTCTCTGTTGCTTCACTTATGATGGGTGTTGGAGGTGTTAAGAAAGACATCAGTGCCATGCTTGTTGCTGGTTTTGCTGGATTAGTTGCAGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTGTCTGTGTACACTCAGTATGACATAGAGGTGACTCAGCTTAAAAGAGAGAGGGAAGCTAATAACAATGGAGAATCTGAAAGCTTAAGGGAGAAGCTGCCAAACCCTTTTCAGGCTGCAATGGCATCAGCACTGGCATTTTCTGTTGGTGCATTGGTACCAATGCTAGCAGCTGTGTTTATAAGGAATCACAAGATTAGGATGGGAGTTATTGGTGGTGCAGTTAGCTTGGCATTGTTGGTGTTCGGAGGGATAGGAGCAGTGCTTGGAAACACTCCAGTGAAGAAATCTTGTTTCAGGGTGCTGATTGGAGGTTGGATGGCCATGGCCATAACATTTGGCCTCACCAAATTGGCTGCCTTTGCTGAACTTTGA 660 0.4606 MANLGARTNGISSNQVEIPIHANGVESKPSEESNIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGGVKKDISAMLVAGFAGLVAGACSMAIGEFVSVYTQYDIEVTQLKREREANNNGESESLREKLPNPFQAAMASALAFSVGALVPMLAAVFIRNHKIRMGVIGGAVSLALLVFGGIGAVLGNTPVKKSCFRVLIGGWMAMAITFGLTKLAAFAEL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01345 219 Pfam VIT family 124 211 IPR008217 GO:0005384|GO:0030026
Vimu11g01345 219 Pfam VIT family 44 121 IPR008217 GO:0005384|GO:0030026
Vimu11g01345 219 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 27 214 IPR008217 GO:0005384|GO:0030026
Vimu11g01345 219 CDD Nodulin-21 42 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01345 Vimu-Chr11 14923103 14924011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01345 25 213 Nodulin-like Gene Family AT3G43660 66.667 2.16e-89 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01345 K22736 - gmx:100802489 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01345 11 14923103 14924011 Vimu11g01345 11 14923103 14924011 ECH