Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01343 ATGGCAAACCTTGGAGCTCGAATAAACGATGTTTCATCAAACCAAGTTGAGATCCCCGTCCATTCTGATGGTGTGGAGCCAAAACCAAGTGAGGAGAGCAGCATTGACTACTCACAAAGGGCTCAGTGGCTTAGAGCAGCAGTGTTGGGAGCGAATGATGGGTTAGTCTCTGTTGCCTCACTGATGATGGGTGTTGGAGCTGTTAAGAAAGACATCAGTGCCATGCTTATTGCTGGTTTTGCTGGATTAGTTGCAGGGGCTTGTAGCATGGCAATTGGAGAGTTTGTCTCTGTGTACACTCAATATGACATAGAGATGACTCAGCTTAAAAGAGAGAGGGAAGCTAATAACAATGGAGGAGTGAATGGAGAATCTCAAAGGGAGAAGTTGCCAAACCCATTTCAGGCTGCACTGGCATCAGCACTGGCATTTTCTATTGGTGCTTTGGTGCCAATGTTAGCAGCTGTGTTTATAAGGAGCCACAAGATTAGGATGGGAGTTGTTGTTGCTGCGGTTAGCCTGGCCTTGTTGGTGTTTGGAGGGTTAGGAGCAGTTCTTGGAAAAACTCCAGTGATGAGGTCTTGTCTCAGGGTTCTGATTGGAGGTTGGATGGCTATGGCTGTAACGTTTGGCCTCACTAAATTGATTGGCTCTGCTCAACTTTGA 666 0.467 MANLGARINDVSSNQVEIPVHSDGVEPKPSEESSIDYSQRAQWLRAAVLGANDGLVSVASLMMGVGAVKKDISAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEMTQLKREREANNNGGVNGESQREKLPNPFQAALASALAFSIGALVPMLAAVFIRSHKIRMGVVVAAVSLALLVFGGLGAVLGKTPVMRSCLRVLIGGWMAMAVTFGLTKLIGSAQL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01343 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 216 IPR008217 GO:0005384|GO:0030026
Vimu11g01343 221 Pfam VIT family 44 118 IPR008217 GO:0005384|GO:0030026
Vimu11g01343 221 Pfam VIT family 125 213 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01343 Vimu-Chr11 14908231 14909346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01343 25 221 Nodulin-like Gene Family AT3G43660 65.990 1.78e-95 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01343 K22736 - gmx:100802489 358.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01343 11 14908231 14909346 Vimu11g01343 11 14908231 14909346 ECH