Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01342 ATGGATTCTCTTGGCACTAGTAGCAAGGAAATGCCAATTAACCATGTTGAGATTCTCAAACACTCTAATGATATAGAAGCAAACCCTAACCAAGACATGGAAGAAAACAATATTGAGTACTCTGAAAGGGAACATTGTCTTGGGGCAGCTGTTCTTGGAGCCAAAACTGGGTTGTTCATAACCACCTTACTGATGATTGCCATTGAAGCTTTGAATGAAAACATCATAGTCATGCTTCTTGCTGGTTTCTTAGGAGTAGTTGTTGGTGCTTGCAGCATGCCAGTTGAAGGGTTTGTATCTGTTGACACAGAGGTAGCTCAAATGAAAGTCCACCATAAAGAACACAACGAA 351 0.4074 MDSLGTSSKEMPINHVEILKHSNDIEANPNQDMEENNIEYSEREHCLGAAVLGAKTGLFITTLLMIAIEALNENIIVMLLAGFLGVVVGACSMPVEGFVSVDTEVAQMKVHHKEHNE 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01342 117 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 29 114 IPR008217 GO:0005384|GO:0030026
Vimu11g01342 117 Pfam VIT family 48 115 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01342 Vimu-Chr11 14904508 14904884 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01342 28 109 Nodulin-like Gene Family AT3G43660 50.562 2.30e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01342 - K22736 gmx:100527486 138.272