Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01282 ATGGCGAACCCTAAAACCAAGAGTCTTCATTCGCTGGATGGCGAGGGCGATCCCGAATCATACGAATCGCGGTGGGTTTTCCAGGAGGACGAATATCCCTCCGAGATCGAGGACTTCGACGCAGCCGATTTACGCCACCAGCCTATGTTTGATTCTGAGGACGAGGACAATGGCGAGCATAGACTCGTTCGCACCGGTCCGCGAATCGATTCATTTGATGTCGAAGCTCTCGAGGTTCCTGGCGCTCAGAGAAATGACTACGAGGATGTTAGTGTGGGGAAGGGGATTCTGTTGGCTTTTCAAACTCTCGGTGTTGTTTTTGGTGATGTTGGAACGAGTCCTTTGTATACGTTCAGTGTTATGTTCAGGAAGGCTCCGGTTAATGGAAATGAAGATATTCTTGGAGCTTTATCACTTGTTTTGTACACTTTAATTTTGATTCCTTTACTGAAGTATGTGCTTGTTGTTCTTTGGGCCAATGATGACGGGGAAGGTGGTACGTTTGCATTGTACTCGTTGATTTGTCGAAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCGATCGGATGCTCGAATATCGGGCTTTAGACTGAAGGTGCCATCTCCCGAGCTTGAAAGGTCTTTAAAAATCAAGGAAAGACTAGAGACTTCGCTGACTCTCAAGAAGATTATACTATTATTAGTTCTTGCTGGTATTTCCATGGTCATAGCTAATGGGGTGGTTACGCCGGCAATGTCAGTACTATCATCTGTTAATGGTTTGAAGGTTGGGGTAGATGCAATTAAACAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTATCGTTTTATTCAGTGTACAGAAATATGGAACAAGTAAAGTGGGGCTTGTTGTAGGGCCTGCTTTGTTTATATGGTTTTGTTCTCTGGCGGGCATTGGTATATACAACCTTGTTAAATATGACAGCAGGGTCTTGAGGGCATTTAATCCTATTCACATATATTATTTCTTTGCAAGGAATTCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGCTCGGAGGCAATGTTTGCAGATCTTTGCTATTTCCCTGTACGGTCAGTTCAGCTTACATTTGTATTTCTTGTTTTACCGTGCCTACTGTTGGGATATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGCAATGCTTTCTATTCTTCTGTTCCAAGTGGGGCATTCTGGCCAACATTCCTCATTGCTAACATTGCTGCATTAATTGCAAGTCGGGCTATGACAACAGCCACATTTTCTTGTATAAAACAGTCTGCTGCACTTGGTTGTTTCCCTCGTCTTAAAATAGTTCATACCTCTCGGAAATTTATGGGACAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTTTGGTGTTTGTCTGTACTATATCCAGCCTTGATGAGATTGGAAATGCATATGGCATTGCTGAGCTGGGTGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTTCTTATATGGCAGATTCACATCATTGTAGTGCTGATTTTTGCAGTAGTCTTCCTGGGATTGGAGTTGACTTTCTTTTCATCAGTTTTGTGGAGTGTAACAGATGGAAGTTGGATCATATTGGTCTTTGCTGTATTAATGTTTTTTATAATGTTTGTATGGAATTATGGGAGCAAGCTCAAATATGAAACTGAAGTAAAGCAAAAACTGTCAATGGATTTGATGCGAGAATTAGGCTGTAATCTTGGGACAATACGAGCTCCTGGAATCGGTTTGCTCTATAATGAGTTGGTGAAAGGAATTCCAGGCATTTTTGGCCATTTTCTAACCACGCTTCCAGCTATACACTCTATGATTATATTAGTGAGTATTAAATATGTTCCAGTTCCTATGGTTCCTCAGAGTGAAAGGTTTCTTTTTCGGCGAGTTTGCCAGAGAAGCTATCATATATTTCGCTGCATTGCCAGGTATGGTTACAAAGATGTTCGAAAAGAAAATCACCAGACTTTTGAGCAACTGTTGATGGAAAGCCTAGAGAAGTTTATACGTCGTGAAGCTCAGGAGAGGTCACTCGAGAGTGATGGGGATGATGATTCTGATTCTGAGGATGAGTACTCTGGTTCTAGGGTTCTCATAGCTCCCAATGGGAGTGTTTATTCTCTTGGCGTCCCTCTTCTGGCTGATTTTATTGATACAAACATATCCGTACCCAATTTGGAAGCAAGCACATCTGAGGACGCAAACCCTGAATCTCCTAAGCCCCCAGTGCTTGATGCTGAGCAGAGTCTTGAGAGAGAGTTATCTTTTATACGCAAGGCTAAAGAATCTGGAGTGGTTTACCTTCTTGGTCATGGGGATATAAGGGCTAGGAAAGACTCATGGTTTATCAAGAAGCTAATTATAAATTATTTTTATTCTTTTCTGAGAAAGAACTGCCGGAGGGGGATCACAAATTTAAGTGTACCCCATTCACATTTGATGCAGGTTGGCATGACCTACATGGTTTAA 2541 0.4219 MANPKTKSLHSLDGEGDPESYESRWVFQEDEYPSEIEDFDAADLRHQPMFDSEDEDNGEHRLVRTGPRIDSFDVEALEVPGAQRNDYEDVSVGKGILLAFQTLGVVFGDVGTSPLYTFSVMFRKAPVNGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLRSDARISGFRLKVPSPELERSLKIKERLETSLTLKKIILLLVLAGISMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLIVLFSVQKYGTSKVGLVVGPALFIWFCSLAGIGIYNLVKYDSRVLRAFNPIHIYYFFARNSTKAWYSLGGCLLCATGSEAMFADLCYFPVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGNAFYSSVPSGAFWPTFLIANIAALIASRAMTTATFSCIKQSAALGCFPRLKIVHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSLDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIVVLIFAVVFLGLELTFFSSVLWSVTDGSWIILVFAVLMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMIILVSIKYVPVPMVPQSERFLFRRVCQRSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDSDSEDEYSGSRVLIAPNGSVYSLGVPLLADFIDTNISVPNLEASTSEDANPESPKPPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLIINYFYSFLRKNCRRGITNLSVPHSHLMQVGMTYMV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01282 846 MobiDBLite consensus disorder prediction 10 24 - -
Vimu11g01282 846 NCBIfam potassium uptake protein 98 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g01282 846 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 94 844 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vimu11g01282 846 MobiDBLite consensus disorder prediction 1 24 - -
Vimu11g01282 846 Pfam K+ potassium transporter 99 672 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01282 Vimu-Chr11 14147812 14158880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01282 19 846 Inorganic Solute Cotransporters AT5G09400 78.631 0.0 1300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01282 - - gmx:100803841 1525.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01282 11 14147812 14158880 Vimu11g01282 11 14147812 14158880 ECH
Vimu11g01282 11 14147812 14158880 Vimu2g00403 2 2297178 2298210 PCT