Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01281 CTACTTGATGCATTGGAGCTTAGCAGGCTGACCATGAATACTGTAAAGCAGAATCTTTGGTGGGCTTTCGTCTACAACATTGTAGGAATTCCAATTGCAGCTGGAGCGTTATTTCCCGTAAATGGAACTATTCTGACTCCATCAATTGCTGGGGCTCTCATGGGGCTGAGTTCCATTGGTGTAATGACCAACTCGTTACTTTTGAGATTAAAATTTTCCTCAAAGCAGAAACAAATATATAGTACATCGCCAAATACCAAAATCCATGTGGATTCTGATCTGGCACAACAAAACCAGAAAACAAGCCGACCATACTAG 318 0.4151 LLDALELSRLTMNTVKQNLWWAFVYNIVGIPIAAGALFPVNGTILTPSIAGALMGLSSIGVMTNSLLLRLKFSSKQKQIYSTSPNTKIHVDSDLAQQNQKTSRPY 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01281 105 PANTHER ATP7, ISOFORM B 2 70 - -
Vimu11g01281 105 SUPERFAMILY HAD-like 2 66 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01281 Vimu-Chr11 14146253 14146729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01281 1 69 Primary Pumps ATPases AT1G63440 49.275 1.23e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01281 K17686 - gmx:100796210 192.971