Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01222 ATGGCAAACAACGGTGAACAAAATCAAACTGAAGCTGGAAGGCACCAAGAGGTTGGGCACAAGAGTCTTCTCCAGAGTGATGCTCTTTACCAGTATATTCTGGAGACCAGTGTCTACCCGAGAGAACCTGAATCCATGAAAGAATTGAGAGAGTTGACGGCAAAACACCCTTGGAATATCATGACTACCTCTGCTGACGAAGGACAATTCTTGAACATGCTCCTTAAGCTTATCAATGCCAAGAATACCATGGAAATTGGTGTCTACACTGGGTATTCACTGCTTGCCACCGCCCTCGCTCTTCCTGATGATGGAAAGATCTTGGCCATGGACATTAACAGGGAGAATTACGAGCTGGGTTTACCTGTAATTAAAAAAGCTGGTGTTGACCACAAAATTGAATTCAGAGAAGGTCCTGCTCTTCCAGTTCTCGATGAGATGGTTAAGGATGAGAAGAACCATGGGAGCTATGATTTCATCTTTGTGGATGCGGACAAGGACAACTACCTCAACTACCACAAAAGGTTGATTGAGCTTGTCAAAGTTGGAGGCTTGATCGGGTACGACAACACCCTATGGAACGGTTCTGTGGTGGCACCCCCTGATGCTCCTCTCAGGAAGTATGTTAGGTACTACAGGGACTTCGTGTTGGAGCTCAACAAGGCCTTGGCTGTGGACCCCAGAATCGAAATTTGCATGCTTCCGGTTGGTGATGGAATCACTCTCTGCCGCCGGATCAAGTGA 744 0.4691 MANNGEQNQTEAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRELTAKHPWNIMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALALPDDGKILAMDINRENYELGLPVIKKAGVDHKIEFREGPALPVLDEMVKDEKNHGSYDFIFVDADKDNYLNYHKRLIELVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01222 247 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 246 IPR002935 GO:0008171
Vimu11g01222 247 Gene3D Vaccinia Virus protein VP39 21 247 IPR029063 -
Vimu11g01222 247 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 245 IPR029063 -
Vimu11g01222 247 FunFam Caffeoyl-CoA O-methyltransferase 1 15 247 - -
Vimu11g01222 247 Pfam O-methyltransferase 35 246 IPR002935 GO:0008171
Vimu11g01222 247 PANTHER O-METHYLTRANSFERASE-RELATED 20 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01222 Vimu-Chr11 13340556 13341924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01222 4 246 Monolignol Biosynthesis Gene Families AT4G34050 89.344 4.20e-168 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01222 K00588 - gmx:100811247 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01222 11 13340556 13341924 Vimu11g01222 11 13340556 13341924 ECH