Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01206 ATGATGACTATTATGGCTGAAAATAAAGTAGAAGATGCAACTGTTTGGAGTAGCGAAAAATTCATCCAAAAATTCAAGATATGGTTGTCACAATCATATAAAACACTAGAAGACCAATGGCAGGGAATTTTCTTTGCAGGGCTGCAATACAACATTCAGAGGAAACAATATGCTCAACATGATGATGATGAAGAAATTGGATGGTTAGATCAACAAGCTTTTTCCTTTTTAGCTTCTAGGATGAACAAATTTGGACAAGGAGAGGACTTAGCCAGTGCTGCTGCTACAAAAATACAAAAAAGGCTTTGGAGTTGGAAGAGGAGAAAAGAATTTTTGATCATTCATCAGAGAATTGTTAAAATCCAGGCCCATGTAAGTGGTCACAAGGTCGGAAGGCAATATAGAACAATCATATGGTCCATGGGAATTTTGGAAAAGAAGCAACTCTTAAAAGAGTCAACAATTCTATCATATAGACCACCACCCAAGCCTCCAGACCTGGATTGGAGGACAAAAGCCAGTGGGTTCCCTTCCTAA 537 0.3836 MMTIMAENKVEDATVWSSEKFIQKFKIWLSQSYKTLEDQWQGIFFAGLQYNIQRKQYAQHDDDEEIGWLDQQAFSFLASRMNKFGQGEDLASAAATKIQKRLWSWKRRKEFLIIHQRIVKIQAHVSGHKVGRQYRTIIWSMGILEKKQLLKESTILSYRPPPKPPDLDWRTKASGFPS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01206 178 Gene3D - 90 138 - -
Vimu11g01206 178 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 52 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01206 Vimu-Chr11 13145582 13146431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01206 51 146 CAMTA Transcription Factor Family AT5G09410 59.375 2.91e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01206 K21596 - gmx:100818124 125.561