Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01194 ATGTTGGCCAGCCCCGAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAGCCCACATACCCCAAAAGCAAAGAGAAGCTAATAGGCCCTTCTGCATTGTTCTTTCACCAAGGAGAATACCACACTCGCATCAGGAAGCTGGTGCAAACCTCTCTTTCTCCTGAAACCATTCGAAAACTCATCCCAGACATCGAAACTGAGGTTGTTTCCTCCTTGGAATCGTGGGTTTCCGCTGGACAACTCGTTAACGCTTTCCAAGAAATGAAAAAGTTCTCTTTCAATATTGGCATCCTCTCTGTCTTTGGACACTTGGAACCCAAATATAGAGACCAGCTCAAGGAAAACTACTGCATAGTGGAGAAAGGGTACAACTCTTTTCCAAACAGGATACCTGGAACTGCATACTCAAAAGCACTTTTGGCAAGGAGGAGAATCAGAGGGATTATAAGTGAGATAATCAGCAAGAGAAAGGAGCAGAGATTGGTGGATAAGGATCTGTTAGGCCACTTGCTGAACTACAAGGATGAAAAGGGACAATCAGCAAGTGACGACCAAATTGCTGATAATGTAATTGGGGTACTATTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACATGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAGTAAAAGCAGAGCAAATGGCAGTGTATGAAGCTAATGAAGGGAAGAAGCCATTGACATGGAGTCAGACCAGAAATATGCCAATTACTCATAGGGTAATTTTGGAAAGCCTTAGGATGGCAAGTATCATTTCATTTACTTTTAGGGAAGCTGTGGTTGATGTGGTGTACAAAGGGTATCTTATACCCAAGGGTTGGAAAGTCATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACCCTTCTCCTCACAATTTTGACCCATCAAGGTTTGAGGTTGCTCCAAAGCCCAATACTTTCATGCCATTTGGCAATGGAGTACATTCTTGTCCAGGAAATGAGCTTGCCAAATTGAACATGTTCATTTTGATTCATCATCTAGTAACAAAATATAGGTATAAGGTTGTGGGATATCAGAACGGAATTCAATATAGTCCATTCCCAGTCCCTATGTATGGTCTACCAACAAGATTTTGGAGAAACCAATGGAATCAAAGATGA 1176 0.4226 MLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFHQGEYHTRIRKLVQTSLSPETIRKLIPDIETEVVSSLESWVSAGQLVNAFQEMKKFSFNIGILSVFGHLEPKYRDQLKENYCIVEKGYNSFPNRIPGTAYSKALLARRRIRGIISEIISKRKEQRLVDKDLLGHLLNYKDEKGQSASDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAVKAEQMAVYEANEGKKPLTWSQTRNMPITHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHPSPHNFDPSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMFILIHHLVTKYRYKVVGYQNGIQYSPFPVPMYGLPTRFWRNQWNQR 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01194 391 SUPERFAMILY Cytochrome P450 2 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 328 337 IPR017972 GO:0005506|GO:0016705
Vimu11g01194 391 PRINTS E-class P450 group I signature 325 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS E-class P450 group I signature 335 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS E-class P450 group I signature 188 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS E-class P450 group I signature 254 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS E-class P450 group I signature 294 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PANTHER CYTOCHROME P450 26 2 372 - -
Vimu11g01194 391 Pfam Cytochrome P450 2 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS P450 superfamily signature 255 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS P450 superfamily signature 326 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS P450 superfamily signature 199 216 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 PRINTS P450 superfamily signature 335 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 FunFam Abscisic acid 8 1 385 - -
Vimu11g01194 391 Gene3D Cytochrome P450 1 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g01194 391 CDD CYP90-like 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01194 Vimu-Chr11 12935260 12937571 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01194 1 386 Cytochrome P450 AT3G19270 72.093 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01194 K09843 - gmx:100806350 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01194 11 12935260 12937571 Vimu11g01194 11 12935260 12937571 ECH