Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01121 ATGTCTGAAGCAGGTAATGAAGAGTGGGATGATAGCTTACTTACCAAAGAGGAAGTAGAGGCAAGGTTGCAGAGGAAGGTTGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGCTATGGAAAGCCACTCCAAAATCAACTCACACCCCGGTGGCAGATACAAGATCAGGTGGATTTCCTTGGTGGTGGAACTGGTTGGAAAGACAAGCACCTGCACCTGCAGCAGCAACTCCACAAGAAAGACCAGTGCTTAAGAATTTTCAACTGACACCTCCAAGACCATACTCAGAGCAAAAGACTAGTCCAAGACCCGGATCCAGCACTCAAAGACAACAGCAGCCCCATTTTGCTTTTGATAACATGGATACTCCCACACCAAAGTCCACAAAATCAACCATAGTGACATCTTCAAAACCAGTACGAACACCTCCATATAGAACTCCTCAGGCAAACAGTTCAGGCTCTGGCTCTAAATTTCTGAGACCGAGGGGTGTGGGAGCCAATTCACCCTTTGATGTACCACTGAAGGATGATGAGAGTCTCACAAGCTGCCCACCATTTTCAGTGCCAAACTACATGGCTCCAACCCTCTCTGCCAAGGCCAAAGTACGAGCTAGTAGTAATCCTAGAGAAAGGCTTGGTGGAACTCCAACAAGTACTGATTCAAAGAGGAGACTCTCATTCCCATTGTCACAAGGAATAGGGCCTTTCAAGTGGTCTAAAGGGTTCTCAAGCAAGGATCAAAGGGTGCCAGATAAATTTCAGCCACTTGACTCTATAGGAAATGTGAGTGTGGATTCAACAGTGTCTTTGCCCGCAAGGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGA 873 0.4593 MSEAGNEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHTPVADTRSGGFPWWWNWLERQAPAPAAATPQERPVLKNFQLTPPRPYSEQKTSPRPGSSTQRQQQPHFAFDNMDTPTPKSTKSTIVTSSKPVRTPPYRTPQANSSGSGSKFLRPRGVGANSPFDVPLKDDESLTSCPPFSVPNYMAPTLSAKAKVRASSNPRERLGGTPTSTDSKRRLSFPLSQGIGPFKWSKGFSSKDQRVPDKFQPLDSIGNVSVDSTVSLPARVGRKPFTRFV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01121 290 PANTHER IQ-DOMAIN 5-RELATED 11 237 - -
Vimu11g01121 290 Pfam Protein of unknown function (DUF4005) 171 239 IPR025064 -
Vimu11g01121 290 MobiDBLite consensus disorder prediction 209 233 - -
Vimu11g01121 290 MobiDBLite consensus disorder prediction 217 233 - -
Vimu11g01121 290 MobiDBLite consensus disorder prediction 78 178 - -
Vimu11g01121 290 MobiDBLite consensus disorder prediction 97 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01121 Vimu-Chr11 11912050 11913807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01121 1 289 IQD Protein Family AT3G59690 48.355 3.28e-81 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01121 - - gmx:100807777 509.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01121 11 11912050 11913807 Vimu11g01121 11 11912050 11913807 ECH