Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01120 CGTGATCTTTTGCCTTCATTTTCTGCTCCAGGAAGAGATAGTAATGCTACTGACATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAAAGGGTTTTCACTCACCACTCCAAGGGGAAGGATGCGGATAACAAAGGCACAAAAGAAAAGAAGAAAAGTTTAGGAAAACTAAAGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGTAGTATTGAGAAAATCTTTGGGGACTTTGAAAGGGAGCAACAACTACTGGGGTTAAGGCCAGCCACTCCTCCTGAGAGACCCAAAACTCCACCTTATGTCCCTCCAAGAGCTCCTTCTCCAAGGCCTCCTTCTCCAAGGGCTCCTTCTCCAAGGGCTGCTTCCCCCAGGGCTTCTTCCCCGCGAGTTACCTCTCCCAAAGCTACATCTTTCCGGAATTCTCATCACCAAAAGGAGGTTGGCTACAGACCAGAACCAACTTTGAGGCAGCAGAATGCCTCAGCTACTAAGATCCAGGCTGTTTACAGAGGTTATATGGCCAGGAGGAGTTTTAGAGCACTAAAGGGTCTGGTGAGGCTCCAAGGAGTAGTAAGAGGACAGAATGTGAAGAGACAGACAGTAAATGCCATGAAACACATGCAACTCTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGATGCAGCAAGTATCTTGGGCAAACTCACTGTAAGCCTTTCAAACTTGAGCATGAATTTTTTTTTTTAG 801 0.4607 RDLLPSFSAPGRDSNATDMGKKGSWFSAIKRVFTHHSKGKDADNKGTKEKKKSLGKLKHGETNSFIPLFREPSSIEKIFGDFEREQQLLGLRPATPPERPKTPPYVPPRAPSPRPPSPRAPSPRAASPRASSPRVTSPKATSFRNSHHQKEVGYRPEPTLRQQNASATKIQAVYRGYMARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASILGKLTVSLSNLSMNFFF 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01120 266 Gene3D - 160 214 - -
Vimu11g01120 266 PANTHER IQ-DOMAIN 5-RELATED 19 237 - -
Vimu11g01120 266 MobiDBLite consensus disorder prediction 35 65 - -
Vimu11g01120 266 MobiDBLite consensus disorder prediction 1 22 - -
Vimu11g01120 266 SMART iq_5 162 184 IPR000048 GO:0005515
Vimu11g01120 266 MobiDBLite consensus disorder prediction 96 123 - -
Vimu11g01120 266 MobiDBLite consensus disorder prediction 35 58 - -
Vimu11g01120 266 Pfam IQ calmodulin-binding motif 165 184 IPR000048 GO:0005515
Vimu11g01120 266 MobiDBLite consensus disorder prediction 129 143 - -
Vimu11g01120 266 ProSiteProfiles IQ motif profile. 163 191 IPR000048 GO:0005515
Vimu11g01120 266 MobiDBLite consensus disorder prediction 90 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01120 Vimu-Chr11 11910032 11911944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01120 19 251 IQD Protein Family AT3G59690 52.713 3.12e-71 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01120 - - gmx:100814804 342.043