Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01087 GGCCACCAGAGAAAACACGATCCAATGGGTTCGGTTCTGCCAGAACTGAGCTTGGATTTAAGACCCTCTTTTGTCCCCAAAACCATCACCGATTTCCTCCGTCACCTCTCTTCCGCCACCGACAGGCTCGCCACTCTTCACGATTTCCTCGCTCGCTTGGAAGACGAGCTCCGCAAGATCCACGCCTTCAAGCGCGAGCTTCCTCTCTCCATGCTCCTCTTAAACGACGCAATTTCACTCCTCAAGACGGAATCTCAGAAATGTCGGCCGCGTGATTCTTCACCGGTGTTGGAGGAGTTCATCCCTTTGAAAAAAGAATATGATCGGAATGAAGGAAATAACTCTAATGATAATGACATGGATAACGAATGCAGGGACAAGAAGAATTGGTTGAGTTCGGTGCAGCTTTGGAATAACAGTACTACTAATAACAATGCATCTGATCGGAAACATCAGCAACTTCATTCATTAGAAAATAAGGTACAATAA 489 0.4642 GHQRKHDPMGSVLPELSLDLRPSFVPKTITDFLRHLSSATDRLATLHDFLARLEDELRKIHAFKRELPLSMLLLNDAISLLKTESQKCRPRDSSPVLEEFIPLKKEYDRNEGNNSNDNDMDNECRDKKNWLSSVQLWNNSTTNNNASDRKHQQLHSLENKVQ 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01087 162 MobiDBLite consensus disorder prediction 140 162 - -
Vimu11g01087 162 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 21 151 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01087 Vimu-Chr11 11576421 11576990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01087 15 142 G2-like Transcription Factor Family AT2G03500 36.029 1.89e-16 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01087 - - gmx:100806237 221.09