Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01083 ATGGATTCCAGCAGCGAAGTAGCCCTCGATTTATCACCCTTTCTAAAAATCTACAAAGACGGTCACGCCGAGAGAATTTCCGGCTGCGAAATCGTTCCGCCGGGCGTCGATTCCGCAACAAATGTCCTATCCAATGACTTCGTAATCTCAAAAGAAGACGACGTATCAGCCAGGATCTTCACTCCCAAACTAAGCGATCAAAGCCAAAAGCTCCCCCTCCTCGTCTACTTCCACGGTGGGGGGTTCTGCATAGAAACACCATACTCTCCTCCTTACCATAAATTCCTCAACTCACTTGTTTCCAAGGCCCACATCGTTGCCGTGTCCGTTCACTACAGAAGAGCCCCTGAACACCCCGTTCCCATCGCTCACCAAGATTCCTGGTCTTCGCTCCAATGGGTGGCCTCCCATTTTAACGGAAACGGCCCTGTGGAGTGCCTCAATCGCCACGCTGATTTTGGGAATGTGTTCTTCGCTGGGGACAGTGCGGGAGCAAACATCGCACACCACATGGCTCTACGGGTCGGAATCGACGGCCTTCCGGGTATCAACCTCCAAGGGATTGTGCTGGTTCATCCTTACTTTTGGGGCGTGGAGCGAATCGGTTCTGAGGTCCAAAAGCTCGAGCAAGTTCCCATGGTGGATAATTTGTGGCGTTTCACTTGCCCTGCCTCGACAGGATCCGACGACCCGTTGTTGAACCCGGCTAAGGATCCGAATGTGGGGAAGCTGGCCTCGAAAAGAGTGCTGATTTGTGTTGCTGAGAACGATTTGCTGAAGGATAGGGGTTGGTATTACAAGGAGTTGCTGGAGAATAATAGTGAGTGGGAAGGTGTTGCTGAGGTGATGGAGGCAAAAGGAGAAGGTCACGTCTTTCATTTGTTCGATCCAGATTGTCACAGCGCTGTTTCCTTGCTCCAACGAATTGCTTCCTTCATCAACAACAGTTAA 951 0.5121 MDSSSEVALDLSPFLKIYKDGHAERISGCEIVPPGVDSATNVLSNDFVISKEDDVSARIFTPKLSDQSQKLPLLVYFHGGGFCIETPYSPPYHKFLNSLVSKAHIVAVSVHYRRAPEHPVPIAHQDSWSSLQWVASHFNGNGPVECLNRHADFGNVFFAGDSAGANIAHHMALRVGIDGLPGINLQGIVLVHPYFWGVERIGSEVQKLEQVPMVDNLWRFTCPASTGSDDPLLNPAKDPNVGKLASKRVLICVAENDLLKDRGWYYKELLENNSEWEGVAEVMEAKGEGHVFHLFDPDCHSAVSLLQRIASFINNS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01083 316 Coils Coil 266 286 - -
Vimu11g01083 316 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 156 168 IPR033140 -
Vimu11g01083 316 Gene3D alpha/beta hydrolase 23 316 IPR029058 -
Vimu11g01083 316 Pfam alpha/beta hydrolase fold 74 293 IPR013094 GO:0016787
Vimu11g01083 316 PANTHER ARYLACETAMIDE DEACETYLASE 12 297 - -
Vimu11g01083 316 SUPERFAMILY alpha/beta-Hydrolases 40 315 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01083 Vimu-Chr11 11512721 11517369 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01083 5 314 Carbohydrate Esterase AT3G48700 47.077 9.67e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01083 - - gmx:100801816 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01083 11 11512721 11517369 Vimu11g01083 11 11512721 11517369 ECH