Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01082 ATGTGTGTTCGGGCGGGGATCCACGGGCTTCCGGGTGTTAACGTTGAGGGAATTGTTTTGGTGCATCCCTACTTTTGGGGCGTGGAGCGAATTGGAAGTGAGAGCCAAAAGCCTGAACATCTTGCAGCGGTGGATAATTTGTGGCGTTTTGTTTGTCCCACCTCGACAGGATCCGACGACCCGTTGATCAACCCGGCTACGGATCCGAATCTGGCAAAGCTAGCTTGTAGGAGAGTGATGATCTTTGTTGCTGAGAATGATTTGATGAAGGATCGGGGTTGGTATTACAAGGAGTTGGTAGAGAAGTGTGGGTGGCAGGGTGTTGCAGAGGTTATGGAGGCAAAAGGAGAAAACCACGTGTTTCACTTGTTCAATCCACATTCTGACAACGCTGTCTCCCTGCTCAGTCGATTTGTTTCTTTTATCAACCATAGTAGTGAATAG 444 0.4887 MCVRAGIHGLPGVNVEGIVLVHPYFWGVERIGSESQKPEHLAAVDNLWRFVCPTSTGSDDPLINPATDPNLAKLACRRVMIFVAENDLMKDRGWYYKELVEKCGWQGVAEVMEAKGENHVFHLFNPHSDNAVSLLSRFVSFINHSSE 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01082 147 Pfam alpha/beta hydrolase fold 12 122 IPR013094 GO:0016787
Vimu11g01082 147 SUPERFAMILY alpha/beta-Hydrolases 11 143 IPR029058 -
Vimu11g01082 147 PANTHER ARYLACETAMIDE DEACETYLASE 13 128 - -
Vimu11g01082 147 Gene3D alpha/beta hydrolase 1 146 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01082 Vimu-Chr11 11498856 11499299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01082 1 146 Carbohydrate Esterase AT1G19190 39.597 2.86e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01082 - - gmx:100801816 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01082 11 11498856 11499299 Vimu11g01082 11 11498856 11499299 ECH