Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01079 CACGCTGCCGGTTCCGGCCCAGAGCCCTGGCTCAACGCCCACGGCGATCCAAAAAACGTGTTCCTCGCCGGTGACAGCGCCGGCGGCAACATCGCCCACAACGTGGCGATGCGAGGCAGTGCTGAGGGGTTCGCGGGATTGAAGCTCCAGGGGATGGTGCTGCTTCACCCATTCTTCGGGAACGATAAAAAGGATGAGCTGGTAGAGTATCTGTACCCTACCTACGAAGGACCGAGCAACATGATGATCCACGCCCCGCTGGATCCGAAACTGTCGGATCTGGCGTGTCCGAGGTTGCTGATCTTCGTGTCAGAGAAAGATTTTCTGAGGGACAGAGGATGCAGCTATTACGAGGCGCTGAAGAAAAGCGGGTGGAAGGGTGAGGTGGAGAAGGTGGAGTTCCCCGGAGAAGACCATGTGTTTCATCTTTTTCAGCCGTCTAAGAAAAATTCCTTGGATCTCGTTAAACAGTTTGTCGCATTCTTGAAGCAAACCTCCTCCAGCAGCTGA 510 0.5529 HAAGSGPEPWLNAHGDPKNVFLAGDSAGGNIAHNVAMRGSAEGFAGLKLQGMVLLHPFFGNDKKDELVEYLYPTYEGPSNMMIHAPLDPKLSDLACPRLLIFVSEKDFLRDRGCSYYEALKKSGWKGEVEKVEFPGEDHVFHLFQPSKKNSLDLVKQFVAFLKQTSSSS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01079 169 Gene3D alpha/beta hydrolase 8 168 IPR029058 -
Vimu11g01079 169 Pfam alpha/beta hydrolase fold 10 142 IPR013094 GO:0016787
Vimu11g01079 169 PANTHER ARYLACETAMIDE DEACETYLASE 10 148 - -
Vimu11g01079 169 SUPERFAMILY alpha/beta-Hydrolases 10 164 IPR029058 -
Vimu11g01079 169 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 20 32 IPR033140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01079 Vimu-Chr11 11473499 11475603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01079 1 166 Carbohydrate Esterase AT1G19190 38.333 1.91e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01079 - - gmx:100800199 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01079 11 11473499 11475603 Vimu11g01079 11 11473499 11475603 ECH
Vimu11g00414 11 4405134 4407252 Vimu11g01079 11 11473499 11475603 PCT