Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01064 ATGGAACTATTCCCAGTACAGCCAGATTTGTCCTTGAAAATTACCCCTCCAAACACCAAATCCACATCAACTAATTGGAACAAGAGAACCACTGAAGATGAGATGGATTTGGGGTTTTGGAAGAGAGCTTTTGAATCAAAAACACTCAAAACAGACCTCTCCCTCTCTAATCCAAGAGCTTTTTCTTCATCTTCTTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAACACCAACACCCTTAACCCTAACCCAACCCTTATCCACAACTTCCATAACAACACTGCTAATACCATCCAACAAAAACATTTCTTTTACCACCAAGACCTACCTTTTCTCACACCCATAAGAGGAATCCCACTCTACCAAAACCCTCCTTTCTCATTTCCTCCCTCTTCTTCAACCCCTCCCAAGCGTAACATCAGAGCTCCTCGGATGCGTTGGACCACTGCACTCCATGCTCGCTTCGTCCATGTCGTTCAACTTTTGGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTAGCCCATGTTAAATCTCACTTGCAGAGGGTCTCGTATCATTTACTATTTCATCTGTTGCCTCTGCTTCTGCAAGCTACTAATAAACAGCTTTTTCCTTGGAAGAATGAACCATCCATGTTGAGAGAGAGGCAATCTGATACTTATGATAATGGGTCTTCTGGAGATACATCTGAAGACTTGGTGTTTGATAGAAACTCTCCAAGGAGGTCTGATCTATCTATTAGGCAGGCAAAAACAAGTGTTAATCAAGATATTGGAAATGGTGGCCTTTGGAACAACTCTTCAAGCAGGCAAGCCTTGTTGCATGGGAAGCCAAACCTTGATTCCATTCTCAACCTGCCTTCTGTTCAGGGAATGGATCAAAAGGGCCAAAGCAATGAAATATCAGATGGAAACTCATCCTCAGACATTGCAGAATCAAGTGGCAAGAAGCCAAATTTGGATTTGGAGTTCACCTTGGGTCGATCACTTTGA 1032 0.4264 MELFPVQPDLSLKITPPNTKSTSTNWNKRTTEDEMDLGFWKRAFESKTLKTDLSLSNPRAFSSSSSSSSSSSSSSSSNTNTLNPNPTLIHNFHNNTANTIQQKHFFYHQDLPFLTPIRGIPLYQNPPFSFPPSSSTPPKRNIRAPRMRWTTALHARFVHVVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQRVSYHLLFHLLPLLLQATNKQLFPWKNEPSMLRERQSDTYDNGSSGDTSEDLVFDRNSPRRSDLSIRQAKTSVNQDIGNGGLWNNSSSRQALLHGKPNLDSILNLPSVQGMDQKGQSNEISDGNSSSDIAESSGKKPNLDLEFTLGRSL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01064 343 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 342 IPR044847 GO:0000976|GO:0006355|GO:0010158
Vimu11g01064 343 MobiDBLite consensus disorder prediction 230 246 - -
Vimu11g01064 343 MobiDBLite consensus disorder prediction 55 90 - -
Vimu11g01064 343 SUPERFAMILY Homeodomain-like 142 197 IPR009057 -
Vimu11g01064 343 FunFam Myb family transcription factor 143 200 - -
Vimu11g01064 343 Gene3D - 144 200 - -
Vimu11g01064 343 MobiDBLite consensus disorder prediction 302 327 - -
Vimu11g01064 343 MobiDBLite consensus disorder prediction 302 343 - -
Vimu11g01064 343 MobiDBLite consensus disorder prediction 12 26 - -
Vimu11g01064 343 MobiDBLite consensus disorder prediction 1 28 - -
Vimu11g01064 343 NCBIfam myb-like DNA-binding domain, SHAQKYF class 145 195 IPR006447 GO:0003677
Vimu11g01064 343 MobiDBLite consensus disorder prediction 229 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01064 Vimu-Chr11 11297989 11302224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01064 1 194 G2-like Transcription Factor Family AT4G17695 39.919 5.56e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vimu11g01064 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01064 - - vra:106765977 479.944