Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01054 ATGGAGGGAATGCTGTCCGCGAACGAGCAGCAGAGCATGGTGTCTTCGTTCCTTGAGGTGGCTCAGGGCCAGACTGCCGAGACTGCGCGCCAGTTCCTCCAGGCTACCAGTTGGAAGCTTGAGGAGGCTCTTCAGTTGTTTTTGATAGGTAGTGAAAGTGGGGCAGTGCCGCCTCCAACTTTGCACACTCCGCCTTTGGAAAATGTTGATTCCTGGACTGACCAACCTCCCAGTGAACCTATGAAGGACCCATCGGGGAGTGAAAGTGTTGGACTTAATGAGGCAGAAGAAGTGCGCCCTCCCTTACCTGTAATTAGAGAAACTCTCTATGATGATGCAATGCTGTATGGGTATGTTTTTCTTTTTGTCAGAGATGCAATGCTGTATTATTTGACTGGATCGTCGTTCCAGTGGAGGAAGGGAGGCTTCCTTGGGTGGGGATACTCACCTCTTTGGTCCGACCTGTCGGATCCAGATCGAAGGGGAGAAGAGATGGAAAACAGGGTGAGTGCATTGGAGGGAATATTTGATTCCATGGTGGCGATGTTGGAGGAAATTCGAGCGGAGTGGAGGGGAATGGCTCGAAACATTAATCGCGACCGTGGGAGAAGAAGGAACCAACGTCGGAGCTCCGAAGGAAGTCACGATTCCGCCAACACTGAACGCGAACGAGGAGACGTGCAACATAGCTGGATGAAGCACGTTGAACTACCAATGTTTGAAGGAGCGGACCCCATGGGTTGGATCGCACGGGCGGAGAAACTCTTCGAACTCCAGAACGTGACGGAGAAGGAGAAGATGAAGTCCGTCTATAGATGCATGGAGGGAGAAAACCACGCGTCCGACGTGGAAGAGGTTCATGATGATCTGACGCGGAGGTTTGGCAGACTAAATCGGGACACCATTGTTGAGGAGCTAGCAGCGGTGCAGAAGGAGAGCGTCGACGAGGACATCCAAGAGTTGGAAATTCTGGTGTCGCAACCATCGGGAAAACCAGATCACTCCTCATTTTTTGTCCGTGTAGATCTTGGAACCAACATTATGATGGGTATTGAGGCTGATGTGGCCATTGAGCGAAGACCAGATCCATCCTCATTAGTTTTTAAAGCGGTGAACAGTTATTACCATTTTTATGACATAGTCGCAGAACAAAAAGTTCCTGCAAATATGGATGAAGCACTTGAAGCTGATTATAATACCACTATGGGTGACATGGTATTAGGTGTTGCTCAGAAAGGTGAACAAGCAAAGAAAATGTCTCTTGAAGACGGGTTAGAATATGGCCTCAAGATTCGGCATACTGCACGCATCGAAAGCAGTGAAGAAACGGAACAAAACAGTGTGGAAGAGAGGAACTTGTTCTTTGTTGGATATAAAAATGTGGTGGGGTCATGGAGAGTTTCATGGAGGACCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGCGTATAAGGGATTATAGGCACAAGGTTGAGTTGGAGCTGTCTAACACTTGCAGTGATATTATGATAATTTTAAATGAGAATCTTATCCCATCCACTAATATTGCGGGGTCCACGATGTTTTATTATAAGATGAAAGGAGACCATTACAGGTATTTGGCAGAATTCAAAGCTGGTAATGAAAAAATTGCGGTAGCAGAGCAGTCACTTAAAGCATATCAGACAACTGCTACTGTTGAGAGTGAATTACAACTTACACGTCCTATACGTTTGGGTCTGACTCTAAATTTCTCTATGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCATCTTGCTAAGCAAGTGTTTGGTGTTGACTATGTTGTGACTGAGTGGGCAATCGGCCAAGAGCAACCAAATATTGTTGGTGGTACAATGATGAGTGAACTAAGAGAAGCGGTTAGCATAATTGACTTTTTGAGCACTAGAAAGGATTATATGGCTGAGGTAGAAGCATTGGAAACTACACGGGGACAGTCAGACATCGGAAAGGATGAAGTGAGGGATATAATAAAGAGACTTGATGCAGTGTGGTTAGCTGAATCTTCCCTTGCTAAGTCCATTTATGGAATGCTGGAAGTTACTAGAATTCAAGAAGAATGGAAGATATTGGAGGAGGATTTGCCACCACCCAAGCCTCCAGACTTGAATTGGAGGGAGGGCGTCACCTTGGAAGAGGAGCATTATGGCAAACTGGATCGTCGTTCTAGTGGAGGAAGGGAGGCTTCCTTGGAACCAAGCACCTTAGTTGCATTTCGTAACTTTGAAGAAGAAATGAGAAATCCAGGTGTTTGGGAGCCAGAGCAAGGTGCTGCTTCTACAGCAGAGACTTCTCGAGACAATCTTGCTTCACTTTATCGCCCACCATTTCATTTGATGTTCAATGGTCCTTTTGATAAGGTAAACATGCTTCTTAGATTGGATTTTATGGATTCTGTTAGAGTGGAAATGAGTGAAAGCCAAACCTAA 2481 0.4571 MEGMLSANEQQSMVSSFLEVAQGQTAETARQFLQATSWKLEEALQLFLIGSESGAVPPPTLHTPPLENVDSWTDQPPSEPMKDPSGSESVGLNEAEEVRPPLPVIRETLYDDAMLYGYVFLFVRDAMLYYLTGSSFQWRKGGFLGWGYSPLWSDLSDPDRRGEEMENRVSALEGIFDSMVAMLEEIRAEWRGMARNINRDRGRRRNQRRSSEGSHDSANTERERGDVQHSWMKHVELPMFEGADPMGWIARAEKLFELQNVTEKEKMKSVYRCMEGENHASDVEEVHDDLTRRFGRLNRDTIVEELAAVQKESVDEDIQELEILVSQPSGKPDHSSFFVRVDLGTNIMMGIEADVAIERRPDPSSLVFKAVNSYYHFYDIVAEQKVPANMDEALEADYNTTMGDMVLGVAQKGEQAKKMSLEDGLEYGLKIRHTARIESSEETEQNSVEERNLFFVGYKNVVGSWRVSWRTLSSIEQKEESKGNELNVKRIRDYRHKVELELSNTCSDIMIILNENLIPSTNIAGSTMFYYKMKGDHYRYLAEFKAGNEKIAVAEQSLKAYQTTATVESELQLTRPIRLGLTLNFSMFYYEIMNSPERACHLAKQVFGVDYVVTEWAIGQEQPNIVGGTMMSELREAVSIIDFLSTRKDYMAEVEALETTRGQSDIGKDEVRDIIKRLDAVWLAESSLAKSIYGMLEVTRIQEEWKILEEDLPPPKPPDLNWREGVTLEEEHYGKLDRRSSGGREASLEPSTLVAFRNFEEEMRNPGVWEPEQGAASTAETSRDNLASLYRPPFHLMFNGPFDKVNMLLRLDFMDSVRVEMSESQT 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01054 826 Gene3D - 7 49 - -
Vimu11g01054 826 PANTHER 14-3-3 PROTEIN 442 608 IPR000308 -
Vimu11g01054 826 SMART 1433_4 404 653 IPR023410 -
Vimu11g01054 826 MobiDBLite consensus disorder prediction 57 94 - -
Vimu11g01054 826 PRINTS 14-3-3 protein zeta signature 494 518 IPR000308 -
Vimu11g01054 826 PRINTS 14-3-3 protein zeta signature 559 585 IPR000308 -
Vimu11g01054 826 PRINTS 14-3-3 protein zeta signature 445 474 IPR000308 -
Vimu11g01054 826 PRINTS 14-3-3 protein zeta signature 586 612 IPR000308 -
Vimu11g01054 826 PRINTS 14-3-3 protein zeta signature 525 547 IPR000308 -
Vimu11g01054 826 CDD 14-3-3 447 607 - -
Vimu11g01054 826 Gene3D - 421 660 IPR036815 -
Vimu11g01054 826 MobiDBLite consensus disorder prediction 66 82 - -
Vimu11g01054 826 Pfam 14-3-3 protein 444 607 IPR023410 -
Vimu11g01054 826 Pfam UBA-like domain 13 49 - -
Vimu11g01054 826 SUPERFAMILY 14-3-3 protein 443 608 IPR036815 -
Vimu11g01054 826 MobiDBLite consensus disorder prediction 201 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01054 Vimu-Chr11 11173537 11177869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01054 447 640 14-3-3 family AT2G42590 59.487 1.25e-70 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01054 K06630 - gmx:547574 271.552