Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01051 ATGGCTCGCTCTGTGCCTTTGGTCTCGACCATCTTTGTGTTTCTTCTGCTTCTGCTGGCCACCGCAGAGATGGGGCCAACAATGGTGGCGGAGGCAAGGACATGTGAGTCTCAGAGCCACCGTTTCAAGGGACCATGCGTGAGTGACACCAACTCGGAGGACATTGCCGTGGCTTCCGTCGCAGATGCTTCTGCACCAAACATTGTTAAAACTTTGAGACTGGTTCTGGAACATCGAAAAGAAAAGCAATTGGGACTGAGTTACATGACAAGCTTCAGAGGAGTGCATCGCAAGTTCATACACATCGCAAGTTTCAGACGAATCATACGTGAATCGTTGAATCGCGACTTCGTTCTGCGTTTTGGTGTAGTCGTTTCTCTTGAAATTGGTGGAAGTGATGGACCATATCGAAGTAGTTATTCATCATGGGGGAAATATGAAGGGCTAATTGAGACACTTGTATTTGATTCTGACGTATGGAGTTATTTTGTGGTAGTGAGTGTAGTAAAAAGTCTAGGTTACGATGGTTTTAAAGAGTTGTGGTACTCTGTTGGTTGTGGTCCTATCTTAGAAGATAGGCTAGAAGCATTGACTGATGACGTAGGTGCCATGCAAATGGTCACTTTAGCTCACTTAAATGGACGAGTTCATATGTATGTAGTGCACAATGTGTCTGAGGATGAAGTCATTGACATGATTGAGTTTAACGTTGATGAAGGATGTGAGGATGTAGGTGGTGATGATGAGAGGATAGCTGATGAGGGGATAGCTGATGAGGGGGTAGCTGAGGAGGAAGTTGTTGTCGGGCAGGCAGAGGAAGTTCATGGTGAGACTGCTGTCTCACCAGATGGTCAGGCTGGGGATGTTGCTGGTACTGAGGTTGATGAAGATTATGTTCAGATGACAGAGGTTAATAGGGCAGAAGAAGTTGAAGTTGAACTTGAGACTCCTAGTGCTGAGGTTAATAGGGGAAAGGAAGTAGATGGTATTAAGGTGCAGCTTGATAGTGTTGAGGTTGATACGGTACAAGCATGTGAAGTTGAAGTTGAGGCTGAGAGGATACAATCACAGGATGGTCATATGGATGATGTAGAAGTTGGTGATTGGAGTTCAACACATGAAAGTGATGGTGAGATGGATAAGGAGGATGAGTTAGTAGACGTAGATATTGAGTGTGATATAAGTGAAAGCTGTAGTGATTTGGAGGTTGATGTTCAGCCATTTCTACCTGAGTCTGATTCTGATAAGGATGGAGATGAGATTAATGATTGTAGTTGGTTCAATGATGAATGGCAATCTGATGAATTAAGTTCACGTGACAATAGTGATGAAGACAGTGAGCACGAAGGTTATGGACATTTTTCCACATTTATGCAGCCCAAAAATATGGTAGATTTTAAGTGGGAAGTGGGAACCTACTTCGTAGAGAAAGAAGACATCCTTGATGCAATCAAAACTTATGCAATGGAGAATGGGAGAAATTTGAAATTTGTGAAGAATGATAAAAGAAGAATAAGGGTTAGATGCTTGGGCTCAAAAGGAAAATGCCCGTGGGTGGTATATTTTGGTTTCATGGGTGCAATTAAGTCATGGCAAGTAAGGACTGTGTTTGACACTCATACATGTACTAGAGAACACAAGGTTCGACTATTCAATGCAAAATGGCTTAGTAGAAAACTACAAAAAACAGTGAGAGAGAATCCTAATGTCAAGGGAGTTGATATTAGAGAAAAAGTTTGTAGGAAATGGAATATAGCAATATCTAAGAACATGACATATAGGGCCAAAACACATGCATCAGATGAAGTGGCAGGCTCCTTTACTAAGCAATATACTAGAATATATGATTATGCTCATGAGTTATTAGAAAGAAACCTTGGGTCTACAATCAAGGTCAAAGTTGAGCCATATGATGGGAAAGTAATATTCCAAAGGTTTTACGCATGCCTAAAGGCTTGCAAAGATAGCTTTCTTTCATGTAGGCCAATCATTGGGCTTGATGGAGCCTTCTTGAAAGGTCAACATCATGGTGAGCTATTAACTGCTGTGGCCAGAGATGCAAACGACCAAATGTTGCCATTGGCGTATGCAATTGTTGAAGTTGAGAACAAAGACACCTGGAAATGGTTTCTGGAGCTATTGATTGAAGACCTAGGTGGTACAAATGTGTGTTCTGGACTTACAATAATGTCAGATCAACAAAAGGGTTTAAGATATGCTGTAGAAGATGTTATTCCTGGAGTTGCACAAAGATTTTGTGTAAGGCATTTATATGCCAACTTCAGGAAGAAATTCCCTGGAAAAATCTTGAAAATGCTTATGTGGAGGGCAGCTACAACAACTCATCCACAACAATGGGAGACTGAGATGAGAAAGATGAAAGCTGTTAACATAGATGCTTTTAGACATCTCATGGGAATTCCTCCAAGATCAAGGTTCACATCCACAGCTCAAAGTGATATCTTAGTGAATAACATGTCAGAAGCTTTTAATAGCGTTCTGGTAAATACAAGGACAAAACCCATTATTTCAATGTTGGAGGACATCAGATTGTATATGATGAAGAGATGGGCCACTAATAGGTCAAGGGTTACTTCTTTTAAGTCATCAATTTGTCCTAAAATTCAGAGTAGACTAAACAAGGAGGCACAACAAACAAAGTATTGGATTCCCAGCTGGTCTGCACACAAAATTTTCGAAATCAGACATGTGTCCCAAAGTGGGGACAACTTTGTGGTGGATATAGATAAATATACATGTTCTTGCAGGAAGTGGAGCATCAATGGAATTCCTTGTGTGCATGCATTGACAGCAATGAGGTTTCTGAACCTAAATGCAGAGGACTATGTACCACCATGCTTTCAAAAGTCAACCTATGAAGAGATGTATTCCTCCATTATATACCCCATTAATGGAAAACATCTATGGGAGGTCACTGAATGTCAAGATGTGTTGCCTCCACCAAAAAGACAAATGCCTGGTCGTCCTAAGAAGAAAAGGAGATTAGACCAATGA 3015 0.4109 MARSVPLVSTIFVFLLLLLATAEMGPTMVAEARTCESQSHRFKGPCVSDTNSEDIAVASVADASAPNIVKTLRLVLEHRKEKQLGLSYMTSFRGVHRKFIHIASFRRIIRESLNRDFVLRFGVVVSLEIGGSDGPYRSSYSSWGKYEGLIETLVFDSDVWSYFVVVSVVKSLGYDGFKELWYSVGCGPILEDRLEALTDDVGAMQMVTLAHLNGRVHMYVVHNVSEDEVIDMIEFNVDEGCEDVGGDDERIADEGIADEGVAEEEVVVGQAEEVHGETAVSPDGQAGDVAGTEVDEDYVQMTEVNRAEEVEVELETPSAEVNRGKEVDGIKVQLDSVEVDTVQACEVEVEAERIQSQDGHMDDVEVGDWSSTHESDGEMDKEDELVDVDIECDISESCSDLEVDVQPFLPESDSDKDGDEINDCSWFNDEWQSDELSSRDNSDEDSEHEGYGHFSTFMQPKNMVDFKWEVGTYFVEKEDILDAIKTYAMENGRNLKFVKNDKRRIRVRCLGSKGKCPWVVYFGFMGAIKSWQVRTVFDTHTCTREHKVRLFNAKWLSRKLQKTVRENPNVKGVDIREKVCRKWNIAISKNMTYRAKTHASDEVAGSFTKQYTRIYDYAHELLERNLGSTIKVKVEPYDGKVIFQRFYACLKACKDSFLSCRPIIGLDGAFLKGQHHGELLTAVARDANDQMLPLAYAIVEVENKDTWKWFLELLIEDLGGTNVCSGLTIMSDQQKGLRYAVEDVIPGVAQRFCVRHLYANFRKKFPGKILKMLMWRAATTTHPQQWETEMRKMKAVNIDAFRHLMGIPPRSRFTSTAQSDILVNNMSEAFNSVLVNTRTKPIISMLEDIRLYMMKRWATNRSRVTSFKSSICPKIQSRLNKEAQQTKYWIPSWSAHKIFEIRHVSQSGDNFVVDIDKYTCSCRKWSINGIPCVHALTAMRFLNLNAEDYVPPCFQKSTYEEMYSSIIYPINGKHLWEVTECQDVLPPPKRQMPGRPKKKRRLDQ 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01051 1004 MobiDBLite consensus disorder prediction 362 379 - -
Vimu11g01051 1004 Gene3D - 28 63 IPR036574 -
Vimu11g01051 1004 Pfam MuDR family transposase 465 520 IPR004332 -
Vimu11g01051 1004 Pfam SWIM zinc finger 911 940 IPR007527 GO:0008270
Vimu11g01051 1004 PANTHER POLYPROTEIN, PUTATIVE-RELATED 558 1000 - -
Vimu11g01051 1004 Pfam MULE transposase domain 664 760 IPR018289 -
Vimu11g01051 1004 ProSitePatterns Transposases, Mutator family, signature. 732 756 IPR001207 GO:0003677|GO:0004803|GO:0006313
Vimu11g01051 1004 MobiDBLite consensus disorder prediction 362 381 - -
Vimu11g01051 1004 ProSiteProfiles Zinc finger SWIM-type profile. 911 943 IPR007527 GO:0008270
Vimu11g01051 1004 SMART 26again6 918 945 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01051 Vimu-Chr11 11137960 11144507 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01051 1 55 Plant Defensins Gene Families AT2G02120 52.727 1.11e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01051 - - vra:111242285 1104.74