Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu11g01038 | ATGAGTGGTGGCAGGAAGAGGAAGCTGCGTTTAAGCAAGATCTACTCATTCGGGTGCTGCAAGGCATCTTTCAAGGGAGATGATTCACAGATTGGAGGAAAAAATTATTCCAGGGTGGTGTTCTGCAATGAGCCAGATATCTTTGAGGATGGTGTTAAGAATTTTGCAGATAACTCTGTCAGATCTACAAAATATACTCTTGCAACTTTCTTTCCTAAATCTTTGTTTGAACAGTTTAGGAGGGTGGCAAACTTCTATTTTTTGGTCACCGGCACCTTGGCCTTAACAAAACTTGCTCCATATACTGCTGCCAGTGCTATCTTTCCACTGATTGTTGTTATTGGAGCTACTATGGTGAAAGAAGGTATCGAAGACTGGCGCAGGAAAAAACAGGATATAGAGGTGAACAATAGAAGAGTTAAAGTTCATAAAGTTGGTGGTATTTTTGAATATACTGCATGGAAGAATCTGAGGGTGGGGAATATAGTGAAGGTAGAGAAGGACGAATTCTTCCCGGCTGACCTGCTGCTGCTTTCATCCAGTTATGAGGATGCTGTTTGCTATGTTGAGACCATGAATTTAGATGGGGAGACAAATTTGAAGTTAAAACAAGGGTTAGAGATAACATCTTCTTTACAGGAGGATCTTAACTTCCAAAAATTTAAAGCTACAGTGAAATGTGAAGACCCCAATGCAAATTTGTATTCATTTGTTGGGAGCATGGAGTTTGAAGAGAAGAATTATGCCCTTTCTCCTCAGCAACTTCTTCTCCGTGACTCTAAACTTCGTAATACAGACTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGTAGAATTGAGAAGAAGATGGACAAAGTCATCTATTTCTTGTTTTGTATTTTGTTTTTAATGGCATTTGTTGGATCTATTTTCTTTTGCATTGCAACTAAAGATGACTTCCAAAATGGGTTGATGAAAAGATGGTATTTAAGACCAGACGATTCTGCTGTTTTCTTTGACCCAAAAAGACCAGCTGCTGCTGCTTTCTTTCATTGTTTGACAGCCTTAATGTTGTATGGGTTCTTTATTCCTATCTCTTTGTATGTGTCAATAGAAATGGTCAAAGTTCTTCAGAGTATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCCCGAGCTCGTACTTCTAATTTGAACGAGGAGCTTGGGCAGGTTGATACAATACTTTCTGACAAGACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATTGCTGGGGTAGCATACGGCTGTGGTGCTACAGAGGTTGAGAAGGCCATGGGTAGAAGAAAAGGTTCACCACCAATTCATGAGCATGATATTGAATCAGAAGCACATAACATTAGGGGTTCGCTTGATAAAAAAGCACTCATTAAAGGTTTTAACTTTGATGATGAAAGAATAAGAGATGGACATTGGGTAAACGAGCCTCATGCAGATGTTATCCAGAAGTTTTTCCGCGTGTTGGCTGTATGTCATACAGCCATAACAGAAGTGAATGAAGAAACTGGAAATGTTTCATATGAGGCTGAATCCCCAGATGAAGCCGCATTTCTGATTGCAGCCAGAGAACTTGGTTTTGAATTCTACAGAAGGGGTCAGACTAGTTTATCGACATTTGAGTTGGATCCAGTTTCTGGCAATAAAGTTGAAAGTAAGTACTGTTCAACAAAAAGAGCTTTAAATAGCACCTTTCACTATCTGAAGTTGGCATTGATATCTTCACATGGCCAGTTTACTGTAGCTGCTATAGAGAAATACAAGCTTCTCAATGTTTTGGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAGATTTTGCTTCTCTGCAAAGGTGCAGACAGCATCATGTTTGAAAGACTTGCCAAGAATGGGAGGGAATTTGAAGAGAAAACCATGGAGCACGTGCATGAATATGCTGATGCAGGTCTGAGAACCCTTATACTGGCCTATCGTGAGCTTGGTGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCCAAGGCCAAGAATTTAGTCAGTGCTGATCAGGAGAAACTGATTGAGGAAGTAGCAGATAAGATTGAGAAGAACCTGGTCCTTCTTGGTGCCACTGCTGTGGAGGACAAGCTCCAAGATGGGATTATAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAAAATGGGGACAAGATGGCCATTGCCAAGGCATCAAGGCAAAGTGTCCTCTTTCAGATATCTGAAGGTGCTGCACAACTCACTGCGTATAGAGGGAGCTCTCAGAAGGCTTTTGCTCTGATTATTGATGGAAAATCACTTGTTTATGCACTTGAAGACAATATAAAGAACATGTTTCTGGAGCTAGCAATGCATTGTGCATCTGTTATTTGTTGTCGCTCATCCCCAAAGCAGAAGGCACTGGTTACTAGATTGGTTAAATCTGGAACTGGGAAAACAACCTTAGCCATTGGGGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGGTTACTCCTGGTTCACGGACACTGGTGTTACAGAAGGATCTCGTCTATGATATGCTACTTTTTCTACAAGAATATCACATTTGGTTTCACTCTATTCTTGTATGAGGTGTATGCATCATTCTCTGGACAACCAGCTTACAATGACTGGTTTTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCTGTGGTTGCACTTGGGGTGTTTGACCAGGATGTCTCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTTCTATTCAGCTGGCGTAGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTCGATGCAGAGGGTAGAACTGCCGGAAAGGATATACTGGGCGTAACAATGTACACCTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTAGCTATAAGTTACTTCACCTTGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTTCTGGTATATTTTTCTCATGGTATATGGAGCAATGCCCCCACACTTTAGTACAAATGCTTACAAAGTCTTCATTGAAGCTCTTGCTCCATCCCCTTCCTATTGGCTTGTGACATTCTTTGTGGTTATCTCAACCCTTATACCATACTTCTCCTACGCAGCAATTCAGATGCGGTTCTTTCCCATGTACCATGAACTAGTACAATGGATAAGGTATGAAGGGAAGATTAAGGATCCTGAGTTTTGTGATATGGTGCGGCAGAGATCATTGCGGCCAACAACCGTGGGTTCAACAGCACGCTTGGCTGCTAAGGCTCACCACGTAAGAGACAGAAATGTTAAACAGTAG | 3570 | 0.4092 | MSGGRKRKLRLSKIYSFGCCKASFKGDDSQIGGKNYSRVVFCNEPDIFEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRVANFYFLVTGTLALTKLAPYTAASAIFPLIVVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHKVGGIFEYTAWKNLRVGNIVKVEKDEFFPADLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEITSSLQEDLNFQKFKATVKCEDPNANLYSFVGSMEFEEKNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDKVIYFLFCILFLMAFVGSIFFCIATKDDFQNGLMKRWYLRPDDSAVFFDPKRPAAAAFFHCLTALMLYGFFIPISLYVSIEMVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGCGATEVEKAMGRRKGSPPIHEHDIESEAHNIRGSLDKKALIKGFNFDDERIRDGHWVNEPHADVIQKFFRVLAVCHTAITEVNEETGNVSYEAESPDEAAFLIAARELGFEFYRRGQTSLSTFELDPVSGNKVESKYCSTKRALNSTFHYLKLALISSHGQFTVAAIEKYKLLNVLEFNSSRKRMSVIVEDEEGKILLLCKGADSIMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELGAEEYKEFDNKFSKAKNLVSADQEKLIEEVADKIEKNLVLLGATAVEDKLQDGIIIHLDSPEIQALEKNGDKMAIAKASRQSVLFQISEGAAQLTAYRGSSQKAFALIIDGKSLVYALEDNIKNMFLELAMHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSLYNVFFSSLPVVALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDAEGRTAGKDILGVTMYTCVVWVVNLQMALAISYFTLIQHFFIWGSILFWYIFLMVYGAMPPHFSTNAYKVFIEALAPSPSYWLVTFFVVISTLIPYFSYAAIQMRFFPMYHELVQWIRYEGKIKDPEFCDMVRQRSLRPTTVGSTARLAAKAHHVRDRNVKQ | 1189 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu11g01038 | 1189 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 426 | 432 | IPR018303 | - | |
Vimu11g01038 | 1189 | Pfam | Phospholipid-translocating ATPase N-terminal | 41 | 104 | IPR032631 | - | |
Vimu11g01038 | 1189 | Pfam | Cation transport ATPase (P-type) | 523 | 660 | - | - | |
Vimu11g01038 | 1189 | Gene3D | - | 590 | 733 | IPR023299 | GO:0000166 | |
Vimu11g01038 | 1189 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 885 | 1135 | IPR032630 | - | |
Vimu11g01038 | 1189 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 500 | 736 | IPR023299 | GO:0000166 | |
Vimu11g01038 | 1189 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 37 | 1146 | - | - | |
Vimu11g01038 | 1189 | NCBIfam | phospholipid-translocating P-type ATPase | 617 | 1142 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326 | |
Vimu11g01038 | 1189 | NCBIfam | phospholipid-translocating P-type ATPase | 55 | 570 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326 | |
Vimu11g01038 | 1189 | NCBIfam | HAD-IC family P-type ATPase | 829 | 939 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Vimu11g01038 | 1189 | SUPERFAMILY | Calcium ATPase, transduction domain A | 142 | 283 | IPR008250 | - | |
Vimu11g01038 | 1189 | SUPERFAMILY | HAD-like | 419 | 912 | IPR036412 | - | |
Vimu11g01038 | 1189 | FunFam | Phospholipid-transporting ATPase | 116 | 286 | - | - | |
Vimu11g01038 | 1189 | Gene3D | - | 112 | 287 | - | - | |
Vimu11g01038 | 1189 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 53 | 1135 | IPR023298 | - | |
Vimu11g01038 | 1189 | PRINTS | P-type cation-transporting ATPase superfamily signature | 424 | 438 | - | - | |
Vimu11g01038 | 1189 | PRINTS | P-type cation-transporting ATPase superfamily signature | 857 | 876 | - | - | |
Vimu11g01038 | 1189 | CDD | P-type_ATPase_APLT_Dnf-like | 57 | 1017 | - | - | |
Vimu11g01038 | 1189 | Gene3D | - | 734 | 897 | IPR023214 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu11g01038 | Vimu-Chr11 | 11017706 | 11024381 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu11g01038 | 1 | 1183 | Primary Pumps ATPases | AT1G68710 | 68.417 | 0.0 | 1762 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu11g01038 | K01530 | - | gmx:100781421 | 2065.43 |