Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01007 ATGAACTACAAGGGATTGGCAGCTGGAGGAGCAAGAGGAGGTGCACCAATGGCCAGAATTGCTGTGTACAAGACATGTTGGGATTCTGGTTGTTATGATGTGGACTTGCTAGCTGCCTTCGATGATGCCATAAGAGATGGGGTTCACATTTTGTCTCTTTCACTGGGTGCTGAATCACCTCAAGGAGACTATTTCAGTGATGCCATTTCTGTGGGGTCATTCCATGCGGCTAGTCGTGGGGTGCTGCCTGATGTCACAGCTCCAGGTCTAAATATCCTTGCAGCTTGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCCATGGCGTGTCCTCATATAACAGGAATCGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCATCTGCTATCAAATCTGCCATCATGACAACTGCTACAATACTGGATAAGCACCACAGACCCATCACTGCAGATCCAGAGCAAAGAAGGGCAAATGCATTTGACTACGGATCAGGGTTTGTAAACCCTGCTAGAGTTCTTGATCCTGGTCTCATCTATGACTCAGAGCCTGCAGATTATGTTGCATTCCTGTGTTCAATTGGTTATGATCAGAGGTCACTCCATCAAGTTACAAGAGACAACAGAACCTGTGATAGGGCATTCAACACAGCATCTGACCTGAACTACCCATCTATTTCAGTGCCCAATCTTAAAGATAACTTTTCTGTTACTAGGATTGTGACTAATGTTGGGAAAGCAAGAAGTGTTTATAAAGCTATAGTGTCTTCTCCACCTGGTGTTAGAGTCAGTGTTATACCTAACCGGTTAATTTTTACAAGAATTGGGCAGAAAATGAATTTCACTCTGAAGTTCAAAATAACTGCTCCCTCAAAGGGATATAAATTTGGGTTCTTGTCATGGGGGAATGGGAGGTCACAAGTCACTAGTCCTTTGGTTGTCCAGGTTGCACCTGGATTAAAATAG 981 0.4444 MNYKGLAAGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAASRGVLPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHITGIATLVKAVHPSWSPSAIKSAIMTTATILDKHHRPITADPEQRRANAFDYGSGFVNPARVLDPGLIYDSEPADYVAFLCSIGYDQRSLHQVTRDNRTCDRAFNTASDLNYPSISVPNLKDNFSVTRIVTNVGKARSVYKAIVSSPPGVRVSVIPNRLIFTRIGQKMNFTLKFKITAPSKGYKFGFLSWGNGRSQVTSPLVVQVAPGLK 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01007 326 Gene3D - 196 322 - -
Vimu11g01007 326 Pfam Subtilase family 82 150 IPR000209 GO:0006508|GO:0008236
Vimu11g01007 326 ProSitePatterns Serine proteases, subtilase family, serine active site. 109 119 IPR023828 -
Vimu11g01007 326 SUPERFAMILY Subtilisin-like 5 180 IPR036852 GO:0004252|GO:0006508
Vimu11g01007 326 Pfam Subtilase family 10 67 IPR000209 GO:0006508|GO:0008236
Vimu11g01007 326 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 82 IPR045051 -
Vimu11g01007 326 FunFam Subtilisin-like protease SBT1.5 196 322 - -
Vimu11g01007 326 Gene3D Peptidase S8/S53 domain 83 192 IPR036852 GO:0004252|GO:0006508
Vimu11g01007 326 Gene3D Peptidase S8/S53 domain 2 81 IPR036852 GO:0004252|GO:0006508
Vimu11g01007 326 ProSiteProfiles Serine proteases, subtilase domain profile. 1 179 - -
Vimu11g01007 326 Pfam Fibronectin type-III domain 225 319 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01007 Vimu-Chr11 10577539 10580630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01007 5 87 Subtilisin-like Serine Gene Family AT3G14240 51.807 1.68e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01007 - - gmx:100808547 460.299