Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01003 ATGGTCTTTGCCAAACTCCAGGGCGCGAAGAACAGCCTCCGAATCTCTTCCTCCCTCCAGGATCTATCTTCCTACCGGAACATCGACCCGGAACATGGCCTTCTCCGAGACCCCATCAGCGCAAGTTTCTCCAAGACCAAACCGCTCCAGCTCCCCAACCCGGTTCGCCGCAAATGCCTCGCCCCGATCGCGATCATTGCCTTCCTCCTCCTCATCCTTTTCCTTCTCTACATCTTCTACTCCCACCAAGCCTCCCCCAAATACTACGTCGTTCTCGACTGCGGCAGCACCGGGACACGTGTCTACGTCTACAAGGCTCAAGTCCAACAAGCGCACTCCACCAACTTCCCCATCGCCATCCAATCCCTAAAAGACGGCCTCCGTAAGAACCCCGCCAGTGGCCGCGCCTACGACCGGATGGAGACCGAACCGGGCCTCGATAAACTCGTCCGCAACGTAACCGGTTTGAAAACCGCGCTCAAACCGCTTCTAAAATGGGCGCAGAAGCAGATTCCTGAAGCTTCCCACAGGTCCACTTCCTTGTTCCTCTACGCCACCGCTGGGGTCCGGAGACTCCCCTTCGATGACTCCAAGTGGCTGCTCGATAATGCGTGGAACGTGCTTAAAGGTTCGCCTTTTGTGTGTCGGAGGGCTTGGGTGAAGATCATTTCCGGCACTGAGGAAGCTTACTTTGGCTGGATTGCGCTTAATTATGACAGTGGCAATCTCGGCGTTGAGCCCCGTAAGGAAACCTACGGTGCCCTTGATTTGGGCGGTTCTTCTCTTCAGGTGACGTTTGAGGGTTATAATCAAAAGCATTTCAATAGTGAGACTAGTTTGTATGTTAGGATTGGGTCTGTAAACCATCATTTGACTGCTTATTCTCTTGCTGGTTACGGCCTCAATGAGGCCTTTGATAAGTCTGTTGCGCGTGTTTTCAAGAAGTTTGGGTATAGTGTTGCGGATGCTGTGAAGGGGAATGTGGAGGTTAAGCATCCGTGCTTGCAGTCTGGATACAAGGAGCGCTACACGTGCTCGCATTGTGCTGCTTTGGAGAAAGGAGGGGAGAGTCCTAAGGTTGAGGGGAATGAGAATTTGTTAGGGAAGAATGAAGGATTGAAGACCACGGTGACTCTTGTTGGCGTGCCGAATTGGCAGGAGTGTAGCGCGCTGGCGAAGGTTGCTGTGAATTTGTCTGAATGGAGTGATGTTAGTCCTGGGCTGGATTGTGAGATTCAACCCTGTGCTCTTGGTGATAACTTGCCTCGCCCTATGGGACACTTTTATGTGATTTCTGGATTTTTTGTGGTGTATAGATTTTTCAACTTGAGTGCAGAGGCCACGCTTGAGGATGTGTTGGAGAAGGGTAGGGAATTCTGTGAGAAGAGATGGGATGTTGCAAAGACGAGTGTTGCTCCTCAGCCCTTTATTGAGCAGTACTGCTTTCGGGCACCGTATATTGCATCATTGCTTAGAGATGGTTTACACATTACCGATAAGAGTATAACTGTTGGTTCTGGAAGTATCACTTGGACACTTGGAGTGGCTTTGTTGGAAGCTGGGAAGGCGTATTCTGTTAGATTTGGCCTTCGTGGTTTTGGCTTGCTTCAGATGAAGATGAATATACCTTTTCTTATTCCCATTTTGATACTTTCGTTTATTCTTCTGCTTTGTGCTTTGTCGTGGGTTGTCAATTGGATGCCAAGATTTTTCCGGAGACAATATCTTCCATTTTTCAGGCATAACAGTGGGTCCAGTGCATCTGTCCTTAATATCCCATCTCCATTTCGGTTTCGGCGGTGGAGTCCAATCAATTCTGGTAAGCTAATTGCACAACTGATATCTGAATTTTTGATGATCCGATAA 1866 0.4941 MVFAKLQGAKNSLRISSSLQDLSSYRNIDPEHGLLRDPISASFSKTKPLQLPNPVRRKCLAPIAIIAFLLLILFLLYIFYSHQASPKYYVVLDCGSTGTRVYVYKAQVQQAHSTNFPIAIQSLKDGLRKNPASGRAYDRMETEPGLDKLVRNVTGLKTALKPLLKWAQKQIPEASHRSTSLFLYATAGVRRLPFDDSKWLLDNAWNVLKGSPFVCRRAWVKIISGTEEAYFGWIALNYDSGNLGVEPRKETYGALDLGGSSLQVTFEGYNQKHFNSETSLYVRIGSVNHHLTAYSLAGYGLNEAFDKSVARVFKKFGYSVADAVKGNVEVKHPCLQSGYKERYTCSHCAALEKGGESPKVEGNENLLGKNEGLKTTVTLVGVPNWQECSALAKVAVNLSEWSDVSPGLDCEIQPCALGDNLPRPMGHFYVISGFFVVYRFFNLSAEATLEDVLEKGREFCEKRWDVAKTSVAPQPFIEQYCFRAPYIASLLRDGLHITDKSITVGSGSITWTLGVALLEAGKAYSVRFGLRGFGLLQMKMNIPFLIPILILSFILLLCALSWVVNWMPRFFRRQYLPFFRHNSGSSASVLNIPSPFRFRRWSPINSGKLIAQLISEFLMIR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01003 621 Gene3D Exopolyphosphatase. Domain 2 225 506 - -
Vimu11g01003 621 Pfam GDA1/CD39 (nucleoside phosphatase) family 84 518 IPR000407 GO:0016787
Vimu11g01003 621 Gene3D - 79 224 - -
Vimu11g01003 621 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 64 522 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01003 Vimu-Chr11 10514027 10515892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01003 8 607 Nodulin-like Gene Family AT4G19180 60.454 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01003 - - gmx:100809597 968.378