Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01001 ATGGCAGCAGTGTCAGGGGGTGAGATATGGAAGGCCCACACTGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTTGCCCTTAATGTCGGCGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATATCATTGCCCTCGCCATTCTTGCTCCCCTAGCTTTTATCCGTGAAAAGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAATCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTGATGATGGGATATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCTCTTGTGTTTTAGGTGCTGTACTGATGGTTTTGTATCGTGGTCCGGCATTGATAGGATATTCAGAAACAGACTTTGTATCACATAATGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTAGTGGTTTACTGGATCTCGGATTTGATCAATTTCATCTCGGAGTTCTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGACCTGTTTTAATCTTATTAAGCTGTTTGCAGCTACACCACGACAGTTGTGGAGACTGCAGAACTTTGAAACGGATGTGAAAATCGAGTTTGAACAAGAAAATCAAGCTTGTATGACAACTGAAAAAGTGTGTTTGCCTAGGACTAGTCAAAGGGCTAGCGAACAGGCAGGGATCCATTGCAAGTTCTTGAACTTGAGTCCTACATTGGAAGAATGGAATTCTATTATGGTGTCTATGAGATCTTGGGCTCTCCAACTAGAACTGCTAGCTCCACTATTAAAAAAGTATCCTGCAAACCTGTCTGTCACGGCATATTCATACTTCTTTGGAGCTGTTCTGATGGTAACTACATCATTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCTGAAACTATTGCTGTTATTTATGCGGGATTTATCGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCCTGGGGCCAGCCATGGTTGCTCTATATAACCCACTTCAACCAGGAGCTTCTGCTCTCCTATCCAGAATTTTTCTAGGAAGTCCAATTTACATGGGAAGCACCCTCTGCGCAGCAACCACAACCGCACCACACAACAGCCGCACAAATAGAGAGGAGTTGGAAAGTGAGAGTTGCAGAGCGTTTGGAGGAGGAGGTTTCAAAGCTTTGGTGGGGTGGGGGTGGGAATACGAAGAGGAATCTGTCTGTGTTTTGAGACTGTAA 1308 0.4442 MAAVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNVGVNQIVFCVFRDIIALAILAPLAFIREKIFGNHLLFLIGLSYTNPTYAAAVQPATPVFTFLLAVMMGYEGLAKVGGTFSCVLGAVLMVLYRGPALIGYSETDFVSHNEISAKGQPEPSGWLISGLLDLGFDQFHLGVLCFIGNCMCMAAFLTIQTCFNLIKLFAATPRQLWRLQNFETDVKIEFEQENQACMTTEKVCLPRTSQRASEQAGIHCKFLNLSPTLEEWNSIMVSMRSWALQLELLAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSTLCAATTTAPHNSRTNREELESESCRAFGGGGFKALVGWGWEYEEESVCVLRL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01001 435 Pfam EamA-like transporter family 265 384 IPR000620 GO:0016020
Vimu11g01001 435 SUPERFAMILY Multidrug resistance efflux transporter EmrE 316 387 - -
Vimu11g01001 435 PANTHER WAT1-RELATED PROTEIN 14 386 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01001 Vimu-Chr11 10502353 10508740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g01001 230 331 Nodulin-like Gene Family AT3G45870 48.598 9.94e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01001 - - gmx:100809051 343.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01001 11 10502353 10508740 Vimu11g01001 11 10502353 10508740 ECH