Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00993 ATGTTTAAGTCACACATTTTGGGTTATCCTTGTGTGATGATTTCTAACTCGGAAGCAGCAAAGTTTGTGCTGACCAAAGCTCAACTCTTCAAACCAACATTTCCTGATAGCAAAGAGAGGATGTTGGGGAAGCAAGCCATTTTCTTTCACCAAGGAGCATACCATGCTAACCTCAGAAGGCTTGTCCTTCGCACCTTCACCACCGAGGCCATCAAAAATTTAGTCTCTGACATTGAATCCATTGCCCAAAATTGCCTCAAATCATGGGAAGGAAAGTTGATCACCACTTTCCTCGAAATGAAAACGTATACCATCAACGTGGCCCTGCTGTCAATATTTGGAAAAGATGAAACTCTGAATGCAGAGGTTCTGAAGCGATGCTACTACACCCTCGAGAGAGGGTACAACTCAATGCCCATAAACCTTCCCGGAACACTTTTCCACAAGGCCATGAAGGCAAGGAAAGAGCTTGCAGATATTGTGGCTCGAGTAATCTCAAAAAGGAGGAAGACGAAGCAAGAACACAATGACTTGCTGGGGTCGTTCATGAGTGAAAAAGCAGGACTAACTGATGGACAGATAACAGATAACATCATTGGTGTTATTTTTGCTGCTCGTGACACCACTGCCACAGTACTTACGTGGATTGTTAAGTACCTTGGTGAAAACCCCAGTGTCTTAGAAGCAGCAACTGAAGAGCACGAGTCCATATTAAGGTGCAAAGAAGAAAGTGGAGAAGAAATGGGCCTGAATTGGTCAGACACAAAAAATATGCCTGTGACATCCAGGATCATACAGGAGACTCTAAGAATAGCATCAATTTTGTCTTTTACCTTCAGAGAAGCTATAGAGGATGTTGAATTTGAAGGGTATCTCATACCAAAAGGGTGGAAAGTATTACCACTTTTTAGGAACATCCACCACAGTCCTGACAACTTCAAAGAGCCAGAGAAGTTTGATCCTTCAAGATTTGAGGTGGCTCCAAAACCCAATACTTTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAAATAGCCAAGTTGGAGATGTTGGTTGGCAATCTGGTTTATTACCAAACACAATCTCGTTGTAACCCTTTTCAGGGTATGCAGTGA 1125 0.4302 MFKSHILGYPCVMISNSEAAKFVLTKAQLFKPTFPDSKERMLGKQAIFFHQGAYHANLRRLVLRTFTTEAIKNLVSDIESIAQNCLKSWEGKLITTFLEMKTYTINVALLSIFGKDETLNAEVLKRCYYTLERGYNSMPINLPGTLFHKAMKARKELADIVARVISKRRKTKQEHNDLLGSFMSEKAGLTDGQITDNIIGVIFAARDTTATVLTWIVKYLGENPSVLEAATEEHESILRCKEESGEEMGLNWSDTKNMPVTSRIIQETLRIASILSFTFREAIEDVEFEGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTHACPGNEIAKLEMLVGNLVYYQTQSRCNPFQGMQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00993 374 PRINTS E-class P450 group I signature 343 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS E-class P450 group I signature 262 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS E-class P450 group I signature 302 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS E-class P450 group I signature 213 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS E-class P450 group I signature 333 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS E-class P450 group I signature 193 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 Pfam Cytochrome P450 1 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 336 345 IPR017972 GO:0005506|GO:0016705
Vimu11g00993 374 Gene3D Cytochrome P450 1 359 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS P450 superfamily signature 263 274 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS P450 superfamily signature 334 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS P450 superfamily signature 204 221 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 SUPERFAMILY Cytochrome P450 2 355 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00993 374 PANTHER CYTOCHROME P450 26 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00993 Vimu-Chr11 10362068 10364211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00993 1 355 Cytochrome P450 AT4G19230 75.281 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00993 K09843 - gmx:100807446 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00993 11 10362068 10364211 Vimu11g00993 11 10362068 10364211 ECH
Vimu7g03269 7 27683310 27685563 Vimu11g00993 11 10362068 10364211 PCT