Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00983 ATGGGTTCCAATGGTAGCAAACCCACTCCTTCTTCTCCTTCTTCGACGGGGAGTTTAAGGAAGGGTCGATCTAAGGGCCTTAGAGTTTTTCAATCTTATTGTCTTGGAACTACTTCTGGTTCTCACGACAGTGATAATGCACACCAGGATCAAACATCGGAGGATTCAGAAGCTGCCCACTTTCCGGCTTGTGATAAGGATAAAGTAAATGGCATTGAAGTTACATATGCTAATGGCAATTTAACAAAGTCGTATGAGGTGAAAACAGAGTCATTTACAAAGGTTAAAGCTAGTGAAATAGCTTGTATGCCCTCTAACATTGACCTTCATGAATGGGGAGAAACAAGCATCCCCAACACCTCATCCAGAACTGCCAGCAGCTCTAGCCATAATTCTTCATCCCATTCCTTGAACCCTACAAGTCATTTCCTTTCTCAGCTTAGCCTCATTCCAGGTAGTGTAAGCTTCAGACTTAGCCGAACCACCAGTTTGGGGTCATCAAGGCCTTGTCCTGTTTCTTCTGCAAGTCTCTCAATAATTGACAATGAAGATGAGTGTAATCTCCACTCTATATCTCCTGGAAGTTCGATTAACATAAGAGAAGCACTACAAGGCAATGACCTGCTTCATGCATCTGTTTTCAATCAAATACATGTACAATCTCATGAAGATGCTTCCAGTAATTTAAGGTCAAGTGTCCTTACATCAGGTACACTTGGGAACTTGCACAGAAATCCCACAGATGGAGTTCCCACAAGAGAAGGGCTGGATGTGAACCTATTTTCTCCAAGAATTCAAACAGAGACAGAAATTGATGACACTAGAAATATTGATCAACGAAATGGTGCTCGAGAATTAGTTGAACAGAATGTTCATTTTAGCCGAACTTTAAGTGTTGGAAGACTTCATGACAGAGTTCTTCGTAGAACAACATTTTCAGACCTCACCTTTTTCCCTTTGCAACAGGAAAGAGAGCCGAGAGATGCTAGCCACCATAGCCAGGATATTGACAGGCAATCGGTGGAGGGAGATTCAAGAGTGTCGTCATCTGATCACACGACAGTTAATTCTTCTACATCTAGCATGTCTAACTCCATGTTTGGTATCCAAGACTATGAGGATGAGTCTTCACGATTGAGAGAGGGTAGGTATCAGGATCTTCTGGAGCATAGGTCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCCCAGGTTCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGATAGATCATGTATCTTGTCTGGTCAACATAGAAATGGGCATTGTACATGCCGAATCAATAATCGAAACACTAATTCAAATGATGATACCGGTGCCAGAGCTAGCATATCAAGAATTGTTATGCTCGCTGAAGCCTTATTTGAGGTTCTAGATGAAATTCACCAGCAATCTGTTGTTTTATCTTCCCGGCCATCTGTATCTTGTAGTGGATCTGTTCCTGCACCTAATGATGTTGTTGATTCCTTGCCTGTCAAGTTATATGAGAAGCTGCACAAGCATCAAGAGGATGGTGCTCAGTAA 1563 0.4248 MGSNGSKPTPSSPSSTGSLRKGRSKGLRVFQSYCLGTTSGSHDSDNAHQDQTSEDSEAAHFPACDKDKVNGIEVTYANGNLTKSYEVKTESFTKVKASEIACMPSNIDLHEWGETSIPNTSSRTASSSSHNSSSHSLNPTSHFLSQLSLIPGSVSFRLSRTTSLGSSRPCPVSSASLSIIDNEDECNLHSISPGSSINIREALQGNDLLHASVFNQIHVQSHEDASSNLRSSVLTSGTLGNLHRNPTDGVPTREGLDVNLFSPRIQTETEIDDTRNIDQRNGARELVEQNVHFSRTLSVGRLHDRVLRRTTFSDLTFFPLQQEREPRDASHHSQDIDRQSVEGDSRVSSSDHTTVNSSTSSMSNSMFGIQDYEDESSRLREGRYQDLLEHRSNFLERRRRMRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGHCTCRINNRNTNSNDDTGARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSCSGSVPAPNDVVDSLPVKLYEKLHKHQEDGAQ 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00983 520 MobiDBLite consensus disorder prediction 1 21 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 31 46 - -
Vimu11g00983 520 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 519 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 346 368 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 1 64 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 322 368 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 112 137 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 324 345 - -
Vimu11g00983 520 MobiDBLite consensus disorder prediction 47 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00983 Vimu-Chr11 10240707 10243508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00983 253 510 C3H Transcription Factor Family AT5G45290 58.582 8.42e-78 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00983 - - gmx:100812272 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00983 11 10240707 10243508 Vimu11g00983 11 10240707 10243508 ECH
Vimu7g03284 7 27901758 27905724 Vimu11g00983 11 10240707 10243508 PCT