Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00982 ATGGAGAGTGGAAGAATGATCCCATGGTTAAATCTTGTAGTCTGTGTACTGCTACTGCTTAAGGCAGAAGGATCTTTGGTTCCATTGACTTTGGTCGAAAATGCACTGACGAAAGGAGCTGTTTGTTTGGATGGTAGTCCACCAGCTTACCACTTTGATAAGGGAGCTGGAGAAGGGATTAACAACTGGATTGTCCACATGGAGGGAGGAGGATGGTGTAAAGATGCCGACGATTGCCTTGGGCGTAAGGACACTCGCTTAGGTTCATCTAACCAAATGGTTGAGGATCTTTACTTTTCTGGAATTTTAGGGAACGACCGAGACTATAATCCTGATTTCTACAACTGGAATAGAGTCAAGATTAGGTACTGTGATGGGTCATCGTTCACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATTTGTACTTCAGAGGAGCAAGGATTTTTTCAGCTGTAATGGAAGATTTATTAGCAAAAGGAATGGACAAGGCTGAAAATGCTATTCTCTCCGGCTGTTCAGCTGGAGGATTGACTACTATATTACACTGTGACAATTTTAAAGCTCTGTTACCTTCTGGAGCTAATGTAAAATGTGTTCCAGATGCTGGTTTTTTCATCAATGTGTATGATCCTCTAATTGTCTTTTACTTGGGCTCGACAAAGAATTTGCCCTCATCTTGCACTTCCAAACTCAGCCCAGGACTGTGCTTTTTCCCACAATATGTGCTATCACATATCAGTACCCCAATCTTCATAGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATCTTGGCACCCGGTGCTGCTGATCCCAATGACAGTTGGCATAGCTGCAAGCTTGATTTAAGCAAATGCTCACATGATCAACTAAGTATAGTGCAAGGCTTCAAGAAGGAATTCGAGAAGGCAGTGAGTGTGGTTGGAGACTCTTCATCTAGAGGAATGTTTATAGACTCTTGCTTTGATCACTGTCAAACAGAATCACAGGAAACATGGTTTAAAAGTGACTCACCACATCTTGCCAATACAACAATTGCAAAAGCAGTAGGGGACTGGTTTTATGGTCGAGGTTCTTTCGATCAAATAGATTGCAACTATCCTTGCAACCCCACTTGTCAGAACCTTGTTTCTGATCTAAAAGACCACCCTGGAATATAG 1167 0.4225 MESGRMIPWLNLVVCVLLLLKAEGSLVPLTLVENALTKGAVCLDGSPPAYHFDKGAGEGINNWIVHMEGGGWCKDADDCLGRKDTRLGSSNQMVEDLYFSGILGNDRDYNPDFYNWNRVKIRYCDGSSFTGDVEEVDPTNNLYFRGARIFSAVMEDLLAKGMDKAENAILSGCSAGGLTTILHCDNFKALLPSGANVKCVPDAGFFINVYDPLIVFYLGSTKNLPSSCTSKLSPGLCFFPQYVLSHISTPIFIVNSAYDSWQIRNILAPGAADPNDSWHSCKLDLSKCSHDQLSIVQGFKKEFEKAVSVVGDSSSRGMFIDSCFDHCQTESQETWFKSDSPHLANTTIAKAVGDWFYGRGSFDQIDCNYPCNPTCQNLVSDLKDHPGI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00982 388 PANTHER NOTUM-RELATED 14 377 IPR004963 GO:0016787
Vimu11g00982 388 SUPERFAMILY alpha/beta-Hydrolases 147 261 IPR029058 -
Vimu11g00982 388 Pfam Pectinacetylesterase 21 360 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00982 Vimu-Chr11 10209055 10211714 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00982 5 388 Carbohydrate Esterase AT4G19420 55.116 7.61e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00982 K19882 - gmx:100780707 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00982 11 10209055 10211714 Vimu11g00982 11 10209055 10211714 ECH
Vimu7g03286 7 27911829 27914901 Vimu11g00982 11 10209055 10211714 PCT