Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00978 ATGAGGCCACGCAAGGATAGTGAGAGGCGCAGATTCGCTTCGGAATCGCGAAACTCAGCAGCAGGCTCCGAATCGCCGCGTCGAAGGCCGCGACTGTTCGCTCTGATGGCGGGGCAATCACGGAAATGGATGATCCTAGTTGCAACGATTTGGATTCAGGCCTTCACTGGCACCAATTTCGATTTCTCGCAGTACTCGTCGTCGCTCAAATCCGCCCTCAACGTCTCGCAGGTGCAATTGAACTACCTCGCCACCGCCAACGACATGGGGAAGGTTTTCGGCTGGTCATCTGGCATCGCGCTCATGCACCTTCCCCTATCGGTCGTCTTGTTTATCGCTGCTACCATGGGATTCTTCGGCTACGGCCTCCAGTGGCTCCTCCTCACCGGAGTCGTCGATTTGCCTTATTTTCTGGTCTTTCTTTTGTGCCTTTTAGGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCAGTTAACCGAGCCCTTGCCCTATCGCTCACTGTGAGTTTCAATGGCGTCAGTGCAGCACTATATACCCTTGCTGCCAATTCTATTGACCCTTCCTCCAGTGCACTCTATCTGCTTTTGAATGCTCTCGTTCCCCTTCTTATTTGTATAGCAGCACTTGTTCCTATTCTTCGCCAACCGACTTTAGACCCTCTCCCTCCTGATGCAGTAAACCGGGACTCAATTATATTTCTAATATTGAACATCCTAGCCCTTTTAACTGGTCTTTATCTTCTCCTGTTTGGCTCTTCCACTTCTGGTGTGGCTTCTGCTCGGCTCTGTTTTGGTGGAGCTATTCTCCTCCTCATCTTCCCATTTTGTATTCCAGGCATAGTATATGCTCGGGCATGGTTTCGGAATACCATCCATTCCAGCTTTCGGATGGAAAGCTCCAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAAAGAACTCCATAGCCGTCACAGTAGTCTTGTTAGCAATGGAGACACTTACAACCTGCTAAGTGACAATGGATACATGTATGACAGTCAGAACGCAAAAGAGAGTGATGTATGTTGCGAGAGGGTAATTGGCCAGGATCAATTAGCAATGCTAGGAGAAGAGCACCCAGCTGCAGTAATTGTTCGAAGATTGGATTTTTGGCTATACTATATTACATACTTCTGTGGAGGTACACTTGGTCTAGTCTATAGCAATAATCTTGGACAGATTGCTCAATCTCTGGGCCAGAGCTCAAATACTTCTACGCTTGTCACGCTCTATGCATCTTTTTCCTTTTTTGGACGCTTGCTTTCAGCTGGACCAGACTATATTCGGAATAAGCTCTACTTTGCAAGGACTGGTTGGCTTTCACTTGCACTTATACCAACCCCAGTTGCGTTCTTCCTTCTTGCTGCATCAGACAGTCTTCTGGTACTGCAGACAGGCACCGCACTGATTGGATTGAGCTCTGGTTTTATATTTGCAGCTGCCGTTTCAGTTACGTCTGAGCTGTTTGGACCTAATAGTGTGGGTGTCAATCACAACATCCTCATAACAAATATACCTATTGGCTCTCTTCTCTATGGCTTTCTCGCTGCACTAGTTTATGATGCTAATGCACACTCAATACCAGGAAACTTGATAATGCCTGACTCAGTAGTGTGCATGGGAAGGGAGTGCTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCATTGGACTAGCATCAAGCATCCTATTATTCTTAAGAACCAAGCATGCATATGAACATTTTGAGAAACACCGTATATCAACACAATCAGTTGTGTCTTAA 1824 0.4649 MRPRKDSERRRFASESRNSAAGSESPRRRPRLFALMAGQSRKWMILVATIWIQAFTGTNFDFSQYSSSLKSALNVSQVQLNYLATANDMGKVFGWSSGIALMHLPLSVVLFIAATMGFFGYGLQWLLLTGVVDLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGVSAALYTLAANSIDPSSSALYLLLNALVPLLICIAALVPILRQPTLDPLPPDAVNRDSIIFLILNILALLTGLYLLLFGSSTSGVASARLCFGGAILLLIFPFCIPGIVYARAWFRNTIHSSFRMESSSFILVHDDDLEMHKELHSRHSSLVSNGDTYNLLSDNGYMYDSQNAKESDVCCERVIGQDQLAMLGEEHPAAVIVRRLDFWLYYITYFCGGTLGLVYSNNLGQIAQSLGQSSNTSTLVTLYASFSFFGRLLSAGPDYIRNKLYFARTGWLSLALIPTPVAFFLLAASDSLLVLQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAHSIPGNLIMPDSVVCMGRECYFWTFVWWGCISVIGLASSILLFLRTKHAYEHFEKHRISTQSVVS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00978 607 MobiDBLite consensus disorder prediction 1 15 - -
Vimu11g00978 607 SUPERFAMILY MFS general substrate transporter 272 590 IPR036259 -
Vimu11g00978 607 SUPERFAMILY MFS general substrate transporter 15 223 IPR036259 -
Vimu11g00978 607 Gene3D MFS general substrate transporter like domains 383 598 IPR036259 -
Vimu11g00978 607 MobiDBLite consensus disorder prediction 1 25 - -
Vimu11g00978 607 Gene3D MFS general substrate transporter like domains 3 221 IPR036259 -
Vimu11g00978 607 Pfam Nodulin-like 42 287 IPR010658 -
Vimu11g00978 607 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 43 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00978 Vimu-Chr11 10141533 10146704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00978 1 604 Nodulin-like Gene Family AT1G31470 57.705 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00978 - - gmx:100803546 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00978 11 10141533 10146704 Vimu11g00978 11 10141533 10146704 ECH
Vimu7g03291 7 27942633 27946973 Vimu11g00978 11 10141533 10146704 PCT