Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00863 ATGTGGGGTTCGGTTCCTCTGTTTTCAGGTGCATCAGATATTCACGGCAGCAACTTCGAATTCTCCGAAACCACCACAGCCAACAAGATCCGAAAGAGTCAGTTTTCCGTGAGAGAAACCATCTACAGCGATTGCTCTCCTCTTCCTTTTACCCATGGCCAAATTCTGAAATGGCCTGAATTGAAGGTGTTCAGTTTTGAGGAGCTGAAATCTGCCACAGGGAATTTTAGGACCAACAGATTGCTCGGTGAAGGTGGCACCCTCACCCCCGCCAACCCAGGCTCTGGAATTGAAGTTGCGATAAAAAAGATCAACGATCTAAGGGTTTTCAGAGTGGCAGGAAGACTTTCTCACCCCAACGTGATCAGGTTATTGGGGTACTGTTGGGACGAGGATAAGTTTCTTCTTGTGTATGAGTTCATGCCAAACGGAAGCCTCGAGTGTCATCTCTTCAAAATAGGAAACATGGAGCCACTTTATTGGAATACCCGGCTTAAAATTGCTAAGGGTGCAGCTCGGGGATTAGCTTTCTTGCACGCCACCGAAAATAAAGTCATATTCAGAGATTTCAATACCTCAAATATTCTCGACGAGAATTATGATGCAAAAATATCAGATTTTGGCATAGCTAAATTGGGACTATCTGAGGGACAATCACATGAAACTACCATGATCGTGGGCACCTTTGGTTATGTTGCTCCAGAATATATGCTTACAGGAGACTTGTATGTGAAGAGTGATGTGTATGCATTTGGTGTGGTGCTTCTTGAAATGCTCACAGGCATGAGGGTAATTGACGTAAGAAGGCCAACAGGGCAGGAGAACCTGGTTGAATGGACAAAACCTTGTCTCTCTTCAGGAAAGAAGTTGAAAAGCATTATGGATGGTAGTATAAAGGATCAAATTTCACCCAAGGCTGCATTAGAATCAGCACAACTTATTCTGGAATGCCTAGAGCATGACCCTAAACAACGTCCTTCAATGGAAGAAGTACTTAAGAGATTGGACGTCATTGACGATATCCCATTCAAGGAAGTCAACTTAGTTTAG 1050 0.4381 MWGSVPLFSGASDIHGSNFEFSETTTANKIRKSQFSVRETIYSDCSPLPFTHGQILKWPELKVFSFEELKSATGNFRTNRLLGEGGTLTPANPGSGIEVAIKKINDLRVFRVAGRLSHPNVIRLLGYCWDEDKFLLVYEFMPNGSLECHLFKIGNMEPLYWNTRLKIAKGAARGLAFLHATENKVIFRDFNTSNILDENYDAKISDFGIAKLGLSEGQSHETTMIVGTFGYVAPEYMLTGDLYVKSDVYAFGVVLLEMLTGMRVIDVRRPTGQENLVEWTKPCLSSGKKLKSIMDGSIKDQISPKAALESAQLILECLEHDPKQRPSMEEVLKRLDVIDDIPFKEVNLV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00863 349 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 141 341 - -
Vimu11g00863 349 PANTHER OS01G0588500 PROTEIN-RELATED 35 336 - -
Vimu11g00863 349 Gene3D Transferase(Phosphotransferase) domain 1 141 345 - -
Vimu11g00863 349 ProSiteProfiles Protein kinase domain profile. 76 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g00863 349 SUPERFAMILY Protein kinase-like (PK-like) 57 337 IPR011009 -
Vimu11g00863 349 Gene3D Phosphorylase Kinase; domain 1 52 140 - -
Vimu11g00863 349 Pfam Protein kinase domain 111 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00863 Vimu-Chr11 8879856 8881936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00863 62 341 Receptor kinase-like Gene Family AT4G02010 42.905 1.16e-69 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Vimu11g00863 Pkinase 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00863 - - vum:124825635 513.072