Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00801 ATGGGTGTGTCGCAAAAATGGTTTAGAATTCTTCGCGGAAGATTCATCAGATCATCCAACAAAGACATCATTCTCCCACGCACAAGTATTTGCACTAACGAATGCGAAGAAGCCATACTCAGGAATGAAGACTTCAGTTTCCCTACACCAACACCAACACCAACACCTGTTTCTGCAATCACCAAGGAAGATGTTGCCGCCATTAAGATCCAGGCTTTTTTCAGGGGACATCTAGCAAGAAGAGCATATAAAGCATTAAAAGGGCTAGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATAGCAATGCAGTGTATGCACGCACTCGTACGATTACAAGTCAGGGTTCGTTCAAGGCAGCTACTTGGTAGCTTTGATAAGAAATCAACCATTAACTGA 417 0.4412 MGVSQKWFRILRGRFIRSSNKDIILPRTSICTNECEEAILRNEDFSFPTPTPTPTPVSAITKEDVAAIKIQAFFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLGSFDKKSTIN 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00801 138 Gene3D - 61 111 - -
Vimu11g00801 138 ProSiteProfiles IQ motif profile. 87 114 IPR000048 GO:0005515
Vimu11g00801 138 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 107 IPR027417 -
Vimu11g00801 138 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
Vimu11g00801 138 PANTHER IQ-DOMAIN 5-RELATED 57 127 - -
Vimu11g00801 138 Pfam IQ calmodulin-binding motif 66 84 IPR000048 GO:0005515
Vimu11g00801 138 Pfam IQ calmodulin-binding motif 90 104 IPR000048 GO:0005515
Vimu11g00801 138 SMART iq_5 62 84 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00801 Vimu-Chr11 8344694 8345242 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00801 1 129 IQD Protein Family AT3G51380 48.062 9.96e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00801 - - vun:114179724 229.95