Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00795 ATGGTGAAAGCGAGGCACTCTCGGGTTCAAAAATCGTGGATGACGAGGTGGTCGTGGGTGTTTCTTCTATCAGTGCTGACGATGTTCATGTTTCTCCTAATTCTCCTTCTCCTCGCTCTCCACCTTCTCTCAATGCCCACTTCCTTTGCTCCAGTCCAACATAATCATCTCAATTCCATTGCTCGCAACGCTTCCTACGTAAGCGAAGGAGAAGATGAACAGAGAGAGCAATGGGTTGAAATATTATCATGGGAGCCTAGGGCTTTTCTCTATCATAATTTTCTGACGAAGGAGGAATGTGAATATCTGATTAATATAGCCAAGCCAAACATGCAGAGGTCTAAGGTTCTTAAAAGTGGGATGGTTAAAACTAGCAGCGGAAGGACAAGCTTTGGTACTTTTTTGGATAGAGGTCTGGATAAAACTGTGAGGAAGATTGAGAAAAGAATTGCTGATTTTACTCATATACCTGTTGAGAACGGTGAAGGACTTCAAATTCTGCATTACGAAGTTGGACAAGAGTATGTGGGTCATCATGACTTCTTTGTGGATGAAAATTACACTGCAAATGGGGGTGATCGCATAGCAACAATGTTGATGTACCTTTCAGATGTTGAAGAAGGGGGTGAGACAGTTTTCCCAGATGCAAAGGGAAATTTGAGGTCAGTGCCTTGGTGGAATACTAATGAGCTTTCTTACTGTGCGAAAAAAGGACTTTCAATTAAGCCAAAGATGGGGAATGCTTTACTTTTCTGGAACATGAGGCCTGATGTAACTTATGATCCATCAAGTTTTCATGGTTAG 804 0.4216 MVKARHSRVQKSWMTRWSWVFLLSVLTMFMFLLILLLLALHLLSMPTSFAPVQHNHLNSIARNASYVSEGEDEQREQWVEILSWEPRAFLYHNFLTKEECEYLINIAKPNMQRSKVLKSGMVKTSSGRTSFGTFLDRGLDKTVRKIEKRIADFTHIPVENGEGLQILHYEVGQEYVGHHDFFVDENYTANGGDRIATMLMYLSDVEEGGETVFPDAKGNLRSVPWWNTNELSYCAKKGLSIKPKMGNALLFWNMRPDVTYDPSSFHG 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00795 267 Gene3D q2cbj1_9rhob like domain 78 267 - -
Vimu11g00795 267 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 267 IPR005123 -
Vimu11g00795 267 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 63 267 IPR045054 -
Vimu11g00795 267 SMART p4hc 86 266 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vimu11g00795 267 FunFam Prolyl 4-hydroxylase 4 78 267 - -
Vimu11g00795 267 Pfam 2OG-Fe(II) oxygenase superfamily 164 254 IPR044862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00795 Vimu-Chr11 8258478 8259921 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00795 K00472 - aew:130777916 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00795 11 8258478 8259921 Vimu11g00795 11 8258478 8259921 ECH
Vimu11g00795 11 8258478 8259921 Vimu11g00798 11 8275913 8277643 PCT