Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00778 ATGCTTATTGGACATGTCAGAAGTTGCAAACTAGGACAGTCGGGACATGACTGTTCATCACAGACAACTGTTCCAAATTTGTCACCTTTCCCTACCCCTCCATTCCAAATCCAGCCCCACTTCATCTTCCACCAAATGCTGTCATCTTCATCAATAAACACAACCACCACCACCACCACCTGCAACAGGAACAACCTGAACCACAAACCCCTCTCTTCCTCACTACCTTCACACTTCTCACACCAAACCCCGACAACCAACAACACTACCAACAACAAAGCCATGGAAGATGTATGGGACGGCATCAACCTCACTTCCTTAAGCGGCCACAACACCAACACTACCCCCACTTCCAAAGGTGCAATTTTTCAAGACTTTCTAGCTCGACCCTTTGACAGCTTCACTGTGGACACATCTCCGGTGACTGCTCTCACCTTGAGCACGCGTTCTGACTACCCTCCCCCGCAGAAGGACCTGCAATTGGTGCATACAGCTTCAAAGACCGAACCTTTTGCCCACCCATTTTCAAATAAAAGAGCCCCACCACTATCAAGGGACATGCGCGACGCACGACTCATGAAGAATCGCGAATCTGCTGCTCGATCCAGAGCCAGAAAGCAGGAAAATATTGCTTCTTCTTCAACTCTTAGCTTTAGAGCGTCACCAAAATCCACTGCTTACTTGTTTGAGTTGAAGCAAAAAATCAAGCAGTTGCGAGAAGAGAATGCAAGACTCAGAAAACAGCAGCAACTGCATTTGGGTGAAAGCGCAACGAATGAGTGGAAGAAGGGCAATCTATATCGAACATATACAGCTCCATTTTAA 825 0.4715 MLIGHVRSCKLGQSGHDCSSQTTVPNLSPFPTPPFQIQPHFIFHQMLSSSSINTTTTTTTCNRNNLNHKPLSSSLPSHFSHQTPTTNNTTNNKAMEDVWDGINLTSLSGHNTNTTPTSKGAIFQDFLARPFDSFTVDTSPVTALTLSTRSDYPPPQKDLQLVHTASKTEPFAHPFSNKRAPPLSRDMRDARLMKNRESAARSRARKQENIASSSTLSFRASPKSTAYLFELKQKIKQLREENARLRKQQQLHLGESATNEWKKGNLYRTYTAPF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00778 274 Coils Coil 228 255 - -
Vimu11g00778 274 CDD bZIP_plant_BZIP46 187 258 - -
Vimu11g00778 274 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 62 252 IPR043452 GO:0003700|GO:0045893
Vimu11g00778 274 MobiDBLite consensus disorder prediction 73 93 - -
Vimu11g00778 274 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 205 IPR004827 GO:0003700|GO:0006355
Vimu11g00778 274 Gene3D - 187 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00778 Vimu-Chr11 8128169 8129404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00778 186 274 bZIP Transcription Factor Family AT3G56850 42.222 2.93e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00778 K14432 - vum:124837213 248.825