Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00771 ATGGGAAGTGGCATGAAAGGCTTTTGGTATGATAACCATGCCTTTGGTGCGAATATTTTGATAGCTGCAAAATTTGGAGTCAAGAAGTTCTTACCTCCTTATCTCGATCCAACTTTGCAGCTTCAAGATCTCCTCACTGGTGTAAGTTTTGCCTCAGGTGGGGCCGGATATGATCCTCTAACAGCCGAATTAGTGTCTGTGATGTCATTGTCAGATCAATTAGTCATGTTCAAGGAGTATATAGACAAGATTAAAGATGCAGTTGGAGGAAACAGAACCACACAAATAGTGTCAAAGAGCATATACATAGTGTGCATAGGAAGTGATGACATTGCCAATACTTACACTCAATCACCGTTTAGGCGTGCTGAGTATGATATTCCTTCATACACTGATCTAATGACCTCTGAAGCCTCAAAGTTCTTTGAGACACTATATGGAATGGGAGCTAGAAGGATCGGAGTGTTTGGTATACCAGCTATAGGGTGTGTGCCCTCTCAAAGAACAATGGGTGGAGGCTTAGATAGAGCATGTGTAGAATCTTCTAATGAAGCGGCAATGCTCTTCAATTCGAAGCTTTCTTCTCAAATGGATGCCCTTGGAAAGAAGTTACCAGACGCTAGACTTGTTTACCTTGATTCTTACAATGGATTGCTAAAAATGATTAGAGATCCTGCTAAATATGGTTTCGAAGTGACAGAGAAAGGATGCTGCGGCACAGGGAATATAGAAGTGAGCATTTTGTGCAACCGCTACATCATAAACACATGCTCTAACTCTTCTGACTACATATTTTGGGACAGCTATCATCCAACAGAGCAGGCTTACTATGTTCTTATTGAAAAGTTTGGAATAAAGGAGACTCTGCCACCCTATCTTGATCCAACTCTGGAGATTGAAGACCTCTTAACTGGGGTGTCTTTTGCCTCTGCTGGCTCTGGATATGATCATCTAACAACAGAAGTAGCAGCAGTGTTATCAGTAGAGGATCAACTGAATATGTTCAAAGATTACATAGGAAAACTGAAGGCCGATGCAGGGAAAGAAAGGACAGCTTTCATTCTAAGAGAAAGCGTATTTTTTATCAGTATGGGAAGCAATGACGTTTCAGTAACGTATTTCATGTCACCATATCGGAGAAATGAGTATAATGTTGAAGAGTATACAAGTATGCTAGTCAATATATGTTCAAATTTTCTTCAGGAACTGTATAAATATGGAGCAAGAAAGATTGGAGTACTGAGCCTATCTCCAATAGGATGTGTGCCACTGCAAAGAACATTAGGGGGAGGTGGAGAAAGGAATTGCGTAGAATCAATAAACCAAGCAGCCATGGTCTTCAACTCCAAGCTTTCTTCTTCAATAGAGGCTCTCAACAAAAGTCTTCCAAAAGCTAGGCTTGTTTACCTTGACAACTATAGTGAACTCAATGAAATTATCCAACACTACAACAAATTTGGATTTGAAGTGGGGGATACTGCATGCTGTGGCATTGGAAATATTGAAGCAGGTATTCTGTGTAATTCTTTGTCCTTAAAAGTATGTGAAAATGCTACAAAATATGTATTCTGGGACAGTATTCACCCCACAGAGCGAACTTACAGTATGCTTGTCACAAGTACCATGGCAAAAAATGTTCACAAGTTTGTTTGA 1653 0.4011 MGSGMKGFWYDNHAFGANILIAAKFGVKKFLPPYLDPTLQLQDLLTGVSFASGGAGYDPLTAELVSVMSLSDQLVMFKEYIDKIKDAVGGNRTTQIVSKSIYIVCIGSDDIANTYTQSPFRRAEYDIPSYTDLMTSEASKFFETLYGMGARRIGVFGIPAIGCVPSQRTMGGGLDRACVESSNEAAMLFNSKLSSQMDALGKKLPDARLVYLDSYNGLLKMIRDPAKYGFEVTEKGCCGTGNIEVSILCNRYIINTCSNSSDYIFWDSYHPTEQAYYVLIEKFGIKETLPPYLDPTLEIEDLLTGVSFASAGSGYDHLTTEVAAVLSVEDQLNMFKDYIGKLKADAGKERTAFILRESVFFISMGSNDVSVTYFMSPYRRNEYNVEEYTSMLVNICSNFLQELYKYGARKIGVLSLSPIGCVPLQRTLGGGGERNCVESINQAAMVFNSKLSSSIEALNKSLPKARLVYLDNYSELNEIIQHYNKFGFEVGDTACCGIGNIEAGILCNSLSLKVCENATKYVFWDSIHPTERTYSMLVTSTMAKNVHKFV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00771 550 Pfam GDSL-like Lipase/Acylhydrolase 288 536 IPR001087 GO:0016788
Vimu11g00771 550 Pfam GDSL-like Lipase/Acylhydrolase 26 282 IPR001087 GO:0016788
Vimu11g00771 550 FunFam GDSL esterase/lipase APG 17 280 - -
Vimu11g00771 550 FunFam GDSL esterase/lipase APG 281 546 - -
Vimu11g00771 550 CDD SGNH_plant_lipase_like 281 538 IPR035669 -
Vimu11g00771 550 Gene3D SGNH hydrolase 281 546 IPR036514 -
Vimu11g00771 550 Gene3D SGNH hydrolase 5 280 IPR036514 -
Vimu11g00771 550 CDD SGNH_plant_lipase_like 21 283 IPR035669 -
Vimu11g00771 550 PANTHER GDSL ESTERASE/LIPASE EXL3 20 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00771 Vimu-Chr11 8068740 8081436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00771 278 537 Pollen Coat Proteome AT1G75910 36.226 1.80e-50 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00771 - - vun:114175459 479.944