Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00759 ATGGGTTCTGTTGGAATCAAAAGCTCGGGATCCGAGGTTGTCACCATTGATGTTCATGCAACCAAGGGTTTGATCCAGACCGGTCATGTTTATCTCGATGTCAGGACGGTGGAAGAGTTTCAGAAAGGACATGTGGATGCTGAGAAGATCATTAACATTCCGTACATGTTTAATACGCCAGAAGGTAGGGTGAAGAATCCGGAGTTTCTGAAGGAGGTTTTATCAGCGTGCAAGAAAGAAGACTGCATCATCGTGGGTTGTCAAAGTGGAGTGAGATCTGTGTATGCAACTAGTGATCTTCTGACTGAGGGTTTTAAAGATGTGAAGAACATGGGAGGAGGATATCTTGAGTGGGTTAAAAATCAATTTCCACTGAAAATACCTTTGGATTTGGTTAAAGATGAAGTTACAGTGAAAGAACCTTTGGACTTGCCTAAAAATGAATTACCATAA 453 0.4172 MGSVGIKSSGSEVVTIDVHATKGLIQTGHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVLSACKKEDCIIVGCQSGVRSVYATSDLLTEGFKDVKNMGGGYLEWVKNQFPLKIPLDLVKDEVTVKEPLDLPKNELP 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00759 150 SMART rhod_4 16 124 IPR001763 -
Vimu11g00759 150 PANTHER THIOSULFATE SULFURTRANSFERASE 18 7 127 IPR044684 GO:0003824
Vimu11g00759 150 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Vimu11g00759 150 Gene3D - 6 126 IPR036873 -
Vimu11g00759 150 Pfam Rhodanese-like domain 26 120 IPR001763 -
Vimu11g00759 150 CDD RHOD 20 119 - -
Vimu11g00759 150 ProSiteProfiles Rhodanese domain profile. 25 127 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00759 Vimu-Chr11 7978644 7981781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00759 3 125 Sulfurtransferasese or Rhodanese AT5G66170 55.285 4.22e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00759 - K15692 vun:114178118 278.1