Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00732 ATGGCACCTCGTCTTGTACTTATAATAACCGCTATCGTTTTTCTTCTACTGGCGGAGGCGCCTCCTACCACGGCGGAGCAATGCAACGATAAATGGGAGAGCTGTCGGAACAAGGCGGAGTCGTTGAAACTTAAGGTAATAGCCATATTCAGTATTCTTGTTACGAGCATGATCGGAGTTTCGATTCCCCTGTTCTCCCGGTCTGTTCCAGCGCTGCAACCGGACCGCGACCTTTTCGTACTTGTGAAGGCTTTCGCTTCCGGCGTGATACTCGCCACAGGTTATATGCATGTGCTGCCGGACTCTTTTGAAGATCTAACTTCGGTGTGCCTGCCGGAACGGCCGTGGCGGAAGTTTCCGTTCACCACTTTCATCGCCATGTTATCCGCGGTTCTCACTCTCGTCGTTGATTCCTACTCCATCAGTTTCTTCAAGAAGAAGTTCGCTGCCACTACCGTTAACGGTAACGGTTCCGCTTCCCTTGAAGCCGGAGAGAGGAAGGAAGTGGAAGTATGCGGTCATGGTCATGGACATGATGTAACTGCACATGCAGATAGAGATGCAAATATCGTGGATGCCGGACAGTTGTTGCGGTATCGTGTTGTGGCTCAGGTGTTGGAGTTAGGGATTGTGGTGCACTCAGTGGTGATTGGTTTGTCAATGGGAGCTTCGATGAATCCATGCACGATTAGGCCTCTCATTGCTGCGATATGCTTCCATCAAATGTTTGAAGGAATGGGCTTAGGTGGTTGTATACTTCAGGCTGAATATGGAATGAAGGTGAAAGCTATAATGGTTTTCTTCTTCTCTGTTACAACTCCGTTGGGAATTGTATTGGGGATCGCATTGTCGAATGTTTACAGCGACGCTAATTCAAAGTCGCTTATTGTAGAGGGAGTTCTGAATGCTATATCTGCAGGACTTTTGAACTATATGGCACTGGTTGAACTATTGGCTCCTGATTTTATGGGGTCTAAGATACAAGGTAGTGCAAAGATAATGGCTCTAGCATTTGTGGCAGTTTTGCTAGGTGCTGGCGGCATGTCAGTCATGGCAATATGGGCATGA 1068 0.4794 MAPRLVLIITAIVFLLLAEAPPTTAEQCNDKWESCRNKAESLKLKVIAIFSILVTSMIGVSIPLFSRSVPALQPDRDLFVLVKAFASGVILATGYMHVLPDSFEDLTSVCLPERPWRKFPFTTFIAMLSAVLTLVVDSYSISFFKKKFAATTVNGNGSASLEAGERKEVEVCGHGHGHDVTAHADRDANIVDAGQLLRYRVVAQVLELGIVVHSVVIGLSMGASMNPCTIRPLIAAICFHQMFEGMGLGGCILQAEYGMKVKAIMVFFFSVTTPLGIVLGIALSNVYSDANSKSLIVEGVLNAISAGLLNYMALVELLAPDFMGSKIQGSAKIMALAFVAVLLGAGGMSVMAIWA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00732 355 Pfam ZIP Zinc transporter 43 352 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vimu11g00732 355 PANTHER ZINC/IRON TRANSPORTER 41 352 - -
Vimu11g00732 355 NCBIfam ZIP zinc/iron transport family 33 355 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00732 Vimu-Chr11 7774329 7776265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00732 13 355 Inorganic Solute Cotransporters AT1G31260 55.840 1.67e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00732 K14709 - gmx:100784872 494.967