Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00702 ATGAACATGATAGACCAGCTCACACACAGAGGCCTAGCCAAACTCGCCAAGCAATACGGCGGCGTTTTTCACCTCCGCATAGGGTTCCTCCCCATGGTTGCCATTTCAAACGCGGAAGCGGCACGTGAAGTGCTCCAAGTCCAGGACAACATATTCTCCAACCGTCCCGCCACCATAGCCATCAGGTACCTAACCTACGACCGCGCCGACATGGCTTTCGCTCACTACGGTCCCTTCTGGCGCCAGATGCGGAAAATCTGCGTCATCAAACTCTTCAGCCGCAAGCGCGCCGAGTCCTGGAACTCCGTCAGAGACGAAGTCGACACCATCGTCCGCACCGTTGCGGCGAATGTGGGGAACCCCGTTAACGTTGGGGAACTGGTGTTCAACCTCACGAAAAACATCATCTACCGCGCCGCTTTCGGGTCCAGTTCCCGACAGGGACAAGACAAGTTCATTTCAATTCTTCAGGAGTTTTCCAAGTTGTTTGGGGCCTTCAATATTGCGGACTTTGTGCCTTGTCTCGGGTGGGTTGATCCTCAGGGTCTGAACTTGAGACTCGTACAGGCACGCGCCGCCTTGGATAGCTTCATTGATAACATCATTGAGGAGCACGTGGAGAAGAAGAGGAGCGGCAAGTGTTGTGAGGAAGAAAGTGACATGGTTGATGAGTTGCTTAATTTTTACAGCCAACACCCCAATTTCAGTAATCTATCAAACGACTTGCACAACTCCATCACACTCACCAAAGACAACATCAAAGCCATCATCATGGACGTGATGTTCGGAGGAACCGAAACGGTGGCATCAGGAATCGAGTGGGCAATGGCGGAGCTAATAAGAAACCCAGAAGACCTACGACGCGTGCAGCAAGAACTAGCCGATGTAGTGGGCCTGGACCGGCGCGTGGAGGAATCGGACCTCGAAAAGCTCGTCTTTCTGAAATGCGCGGTGAAGGAGACACTGCGGATGCACCCGCCGATTCCGCTTCTCCTCCACGAGACGGCGGAGGAAGCGGTGGTTTGTGGGTACCACGTACCAAAGGGTTCGCGCGTAATGATAAACGCGTGGGCCATAGGAAGGGACGGGGACTCGTGGGAGGAAGCGGAAGCGTTCAAGCCGTCGCGGTTTCTAAACCCGAGTGTGCCGGATTTCAAAGGGAGCAACTTTGAGTTCATTCCGTTCGGGTCGGGTCGGAGATCCTGTCCCGGAATGCAACTGGGTCTTTACGCGCTGGAAATGGCCGTGGCGCACTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGATGAAACCCAGCGAGTTGGACATGAGTGACGTGTTCGGACTCACCGCGCCCATGGCGAGTCGACTCGTGGCGATTCCATCGAAACGTGTGTTATGTCATCTATAA 1395 0.5434 MNMIDQLTHRGLAKLAKQYGGVFHLRIGFLPMVAISNAEAAREVLQVQDNIFSNRPATIAIRYLTYDRADMAFAHYGPFWRQMRKICVIKLFSRKRAESWNSVRDEVDTIVRTVAANVGNPVNVGELVFNLTKNIIYRAAFGSSSRQGQDKFISILQEFSKLFGAFNIADFVPCLGWVDPQGLNLRLVQARAALDSFIDNIIEEHVEKKRSGKCCEEESDMVDELLNFYSQHPNFSNLSNDLHNSITLTKDNIKAIIMDVMFGGTETVASGIEWAMAELIRNPEDLRRVQQELADVVGLDRRVEESDLEKLVFLKCAVKETLRMHPPIPLLLHETAEEAVVCGYHVPKGSRVMINAWAIGRDGDSWEEAEAFKPSRFLNPSVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALEMAVAHLLHCFTWELPDGMKPSELDMSDVFGLTAPMASRLVAIPSKRVLCHL 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00702 464 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 131 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 402 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 272 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 252 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 355 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 315 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS E-class P450 group I signature 392 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 Pfam Cytochrome P450 9 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 SUPERFAMILY Cytochrome P450 6 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 395 404 IPR017972 GO:0005506|GO:0016705
Vimu11g00702 464 PRINTS P450 superfamily signature 316 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS P450 superfamily signature 393 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS P450 superfamily signature 263 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 PANTHER CYTOCHROME P450 84A1-RELATED 1 464 - -
Vimu11g00702 464 CDD CYP71-like 18 452 - -
Vimu11g00702 464 Gene3D Cytochrome P450 1 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00702 464 FunFam Cytochrome P450 84A1 1 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00702 Vimu-Chr11 7500967 7503772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00702 1 464 Monolignol Biosynthesis Gene Families AT4G36220 71.581 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00702 K09755 - gmx:100807448 808.905