Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00690 ATGGAATGGATTATTGGACTCTGGATTCTGATGGCTATCATCCTTACATGCTGCTGCTACTGCTTTCTCTCTGTCAAAAAGGAGAACGGTGACAGGCTGAAACAGAACAAGAAGAAGAAGAAGAAGAAGAAGGGGAAAGTTCCCAGAGGTAATAAAGGTTGGCCTTTACTTGGAGAAACCCTTGAGTTCATTGCTTGTGGCTACACCTCCAATCCTGTCAGCTTCATGGAAAAACGCAAGTCTCTCTTCTATAGAGAGAATAGCATATCCAAAGAAGGAAGAGCAGAAAAGCCTGCTTCTGCCATAACTGGAGCTATTCTAGATTCACCTTTGGACTTTAGTGGATTGTATGGTAGTGTATTTAAGACAAGCATTTTGGGAACTGGTGTGATTGTGTCCACAGACCCAGAAGTGAACAAGGTGATTCTGCAGAACCAGGGGAACATATTCGTCCCTGCTTATCCAAAATCTGTGAGAGAACTAATGGGAGACTACTCCATCCTCCAAATGAACGGGAACATGCATAGGAAAATTCATTCACTTCTTGGAGGCTTCCTACGATCCCCTCAATTCAAAGCTCGAATCACTACAGATATTCAGCACTCTGTTAAACAATGCTTTGCAACTTGGACCCACCAACCAATTTACGTTCAAGATCAAGTCAAAAAGATCACATTCACTATTCTGGTTAAAGTTCTGCTTAGCATTGGTCCCGGTGAAGATCTAGACTTCTTGAAGAGAGAATTTGAAGAGTTCATAAAAGGGTTGATTTGCTTACCCATCAAGTTTCCTGGAACAAGACTACATAAATCCTTGAAGGCTAAGGAAAGAATGATGAAGATAGTGAAGAGGGTAATAGAGGAAAGGAACAATAATATCGATAAGAAGAAGAATTCAGAAGAGAAAGGAGGTGCAGCAAATGATGTGGTGGATGTGCTCTTAAGGGATATTGGTGATAGCAACACTATCTCTAACATGTTGGAAAATATCTGTGAGAACATAATTGAGATGATGATCCCTGGGGAGGAGACTCTTCCCACGGCTATGACCATGGCTGTCAAATTTCTCAGTGACTCTCCCCTTGCCCTATCCAAATTACTGGAAGAGAACATGGAATTGAAGAGGCAGAAGAATAGTGCAGAGGATTATGTATGGAGTGACTACCTTCAACTGCCATTTACACAAAATGTTATCAGCGAAACTCTGAGAATGGCAAATATTGTGAATGCCATTTGGAGAAAAGCAGTGAAAGACGTTGAAATCAAAGGGTATTTGATTCCTAAGGATTGGTGTGTTGTGGCATCTCTTACTTCTGTTCATATGGATGAGATGAATTACGAAAAGGCTTTTAAGTTTGATCCTTGGAGATGGGAGAAAACAGGAGGAGGAGCTAATAACAATTGGTTTACACCATTTGGTGGTGGACAGAGACTGTGTCCTGGCATAGAACTGTCAAGGCTAGAGCTATCTATCTTCCTTCACCATCTTGTTACCACTTACAGATGGGTAGCGGAGAAGGATGAAATAATATACTTTCCAACAGTGAAGATGAAGAGGAAGCTCCCAATTAGTTCACTCTCAGTTGTGCTCACCGTTGGTTCCTTATCTATTTCCGTTGGAAAAGTTTCGTACAACTACCACAACATCATGCGATGTGGTTGTCACGTGACTTTCCTCCAAATCAACACCCGGTGTTCTGCCATTCCCCATCTCACTTCGGTCTCTTTTCAAGTTCCAAAACTTTGA 1746 0.417 MEWIIGLWILMAIILTCCCYCFLSVKKENGDRLKQNKKKKKKKKGKVPRGNKGWPLLGETLEFIACGYTSNPVSFMEKRKSLFYRENSISKEGRAEKPASAITGAILDSPLDFSGLYGSVFKTSILGTGVIVSTDPEVNKVILQNQGNIFVPAYPKSVRELMGDYSILQMNGNMHRKIHSLLGGFLRSPQFKARITTDIQHSVKQCFATWTHQPIYVQDQVKKITFTILVKVLLSIGPGEDLDFLKREFEEFIKGLICLPIKFPGTRLHKSLKAKERMMKIVKRVIEERNNNIDKKKNSEEKGGAANDVVDVLLRDIGDSNTISNMLENICENIIEMMIPGEETLPTAMTMAVKFLSDSPLALSKLLEENMELKRQKNSAEDYVWSDYLQLPFTQNVISETLRMANIVNAIWRKAVKDVEIKGYLIPKDWCVVASLTSVHMDEMNYEKAFKFDPWRWEKTGGGANNNWFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAEKDEIIYFPTVKMKRKLPISSLSVVLTVGSLSISVGKVSYNYHNIMRCGCHVTFLQINTRCSAIPHLTSVSFQVPKL 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00690 581 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PANTHER CYTOCHROME P450 26 44 503 - -
Vimu11g00690 581 PRINTS E-class P450 group I signature 114 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 Pfam Cytochrome P450 113 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 Coils Coil 363 383 - -
Vimu11g00690 581 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Vimu11g00690 581 Gene3D Cytochrome P450 36 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 SUPERFAMILY Cytochrome P450 111 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00690 581 CDD CYP90-like 117 523 - -
Vimu11g00690 581 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 108 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00690 Vimu-Chr11 7417484 7423990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00690 46 501 Cytochrome P450 AT3G13730 50.218 7.76e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00690 K12637 - gmx:100812489 801.201