Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00679 ATGTCAGCGGAACCGTCTAAGCGCCACCAATGGCAGTGGGAGAACGCCACTGCCGGCGCCGCTGCTGGATTCGCCACCGTCGCTGTTATGCATCCCCTTGATGTTGTTCGAACTAGGTTCCAAGTTAACGACGGTCGAGTCTCGCATCTTCCCAGTTACAAGAACACTGCACACGCCGTTTTCACCATTGCTCGCTCCGAGCTCATGGCTTTCGCTAGCATATCGTGGTTCGTGAAGTATGCGACTTGTTATGATTTTCGTATGTCCTTATTCCTTAAGAAAGAAAAGTATCCTGATAGAATGATTGCCGAACCTTCTAGGTACAGAGTTGCCGAACCATCCTTTTTGTTGCCCACTTTTGGCCCAACAGGCAAGGGTGGTTGTGGGGGTGGGGGAATCATCAGTCAATGTTTTTGGTTAATGGATGTTAAGACCAATAGTAAGGCTCAATGTTCTTCCATCCACATATTATTCATTGGTTTGGGATTAAGAGGCTTATATGCAGGCTTTCTTCCGGGGGTTCTTGGGTCTACCATTTCTTATGACAAAGCCAAACAAAGATATGCAAGGAACAGGGAGGGCAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCTGAAGCAGGAGGTTTGGTTTCCTTGTGCACAAATCCTGTCTGGCTAGTAAAAACGAGATTGCAGCTTCAAACTCCACTTCATCAGACACGTCCATACTCTGGGATTTATGATGCCTTTAAGACCATACTGAGGGAAGAAGGATTTAGTGCATTTTACAAAGGGATTGTTCCCAGCCTGTTTCTGGTTTCTCATGGTGCTATTCAGTTCACAGCATATGAGGAACTACGTAAAGTTATTGTTGATTTTAAGAGTAAGAGAAGTACAGTACATAATCAAAACCCAGATAAATTGCTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTTGCTGCGATACTGCTAACCTATCCATTTCAGGTACAACTGTGTGTCCCGTCTTTTAAAGTTATGCGAGCCCGATTGCAGGTACTGCATTGTCCTTTCAGAGATACATTGCGTGTTTCCATTCTATTAACTCAACGGCCTAGTGGTGATGGTGTTCCAAGATATATAGACACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGAGGTTATTACAGAGGAATTACAGCAAACCTGTTGAAGAATGCTCCTGCTTCTTCAATAACATTTATTGTGTATGAAAACGTTCTAAAATTGCTTAAACCGACTATAAGGAATGACTGA 1284 0.4385 MSAEPSKRHQWQWENATAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSELMAFASISWFVKYATCYDFRMSLFLKKEKYPDRMIAEPSRYRVAEPSFLLPTFGPTGKGGCGGGGIISQCFWLMDVKTNSKAQCSSIHILFIGLGLRGLYAGFLPGVLGSTISYDKAKQRYARNREGKLSPGLHLASAAEAGGLVSLCTNPVWLVKTRLQLQTPLHQTRPYSGIYDAFKTILREEGFSAFYKGIVPSLFLVSHGAIQFTAYEELRKVIVDFKSKRSTVHNQNPDKLLNSVDYAVLGATSKLAAILLTYPFQVQLCVPSFKVMRARLQVLHCPFRDTLRVSILLTQRPSGDGVPRYIDTWHVVKETARFEGIRGYYRGITANLLKNAPASSITFIVYENVLKLLKPTIRND 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00679 427 Gene3D Mitochondrial carrier domain 146 425 IPR023395 -
Vimu11g00679 427 SUPERFAMILY Mitochondrial carrier 162 415 IPR023395 -
Vimu11g00679 427 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 284 IPR018108 -
Vimu11g00679 427 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 422 IPR044712 GO:0006862|GO:0055085
Vimu11g00679 427 ProSiteProfiles Solute carrier (Solcar) repeat profile. 307 419 IPR018108 -
Vimu11g00679 427 Pfam Mitochondrial carrier protein 11 67 IPR018108 -
Vimu11g00679 427 Pfam Mitochondrial carrier protein 196 286 IPR018108 -
Vimu11g00679 427 Pfam Mitochondrial carrier protein 309 421 IPR018108 -
Vimu11g00679 427 Gene3D Mitochondrial carrier domain 1 72 IPR023395 -
Vimu11g00679 427 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Vimu11g00679 427 SUPERFAMILY Mitochondrial carrier 9 92 IPR023395 -
Vimu11g00679 427 FunFam Folate transporter 1, chloroplastic 193 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00679 Vimu-Chr11 7222993 7229873 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00679 162 424 Chloroplast and Mitochondria Gene Families AT1G25380 32.963 1.49e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00679 K15115 - gmx:100809599 417.157