Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00676 ATGGCCACTTCCATGAGCTTTTTCTTGCTTCTTTCTTTACTAGCCTTTGCTCCCTTGTGTTTCTGTAACTACTTCCAAGAGGGTAAACTCTACCCTCAGTTTTATGACTATTCATGCCCACAAGCTCAGAATATCGTCAAGTCCATCCTTGCCAAGTATGTTCAACAGCAACCCCGATTGGCAGCTTCTATTCTCAGGCTTCATTTCCATGATTGCTTTGTCAAGGGTTGTGATGCTTCGTTGCTGTTAGATAGCAGTGAGAACATCATCAGTGAGAAGGGATCAAACCCAAACCGTAATTCAGCCAGAGGATTTGAAGTCATTGATGCAATTAAAGCTGCATTAGAGAGAGAATGCCCTTCTACAGTTTCTTGTGCTGACATCTTGACTCTAGCTGCAAGAGATTCAGTTGTTCTTGTAAGCACTTCACTACCCTCTCTCATGGTGATTTGGTTTCAGAAAAATGTTGCTAGTGGTGGACCAAGCTGGGAAGTACCTTTAGGAAGAAGGGATTCTAGAGATGCAAGCATAAGTGGCTCCAACAACAACATTCCAGCCCCAAATAACACATTTCAGACCATCCTTACAAAATTCCACCTTCATGGACTTGACCTTGTTGATCTAGTTGCTCTATCTGGGAGTCATACCATAGGAAATGCCAGATGCACCACCTTCAGGCAAAGACTCTATAGCCAAATCAGTGGCAATGGCAAGCCAGATTCCACTCTTGACCAATACTATGCTGCTGCATTGCGCAATAGGTGTCCAAGATCTGGGGGTGACCAGAACCTGTTCTTCCTAGACTATGCCACCCCATATAAATTTGACAACACCTACTTCAAGAACCTTTTGGCTTACAAGGGTCTCTTGAGTTCTGACCAAATCCTTCTCACAGACCAAGAATCAGCTGAACTAGTGAAGTCCTATGCTGAAAGTAATGACATTTTCTTTGAACAGTTCGCCAAGTCCATGATCAAGATGGGGAACATATCTCCTCTGACAAATTCAAGGGGAGAGATCAGAGAGAACTGCCGGAAGATCAACTCTTGA 1050 0.4371 MATSMSFFLLLSLLAFAPLCFCNYFQEGKLYPQFYDYSCPQAQNIVKSILAKYVQQQPRLAASILRLHFHDCFVKGCDASLLLDSSENIISEKGSNPNRNSARGFEVIDAIKAALERECPSTVSCADILTLAARDSVVLVSTSLPSLMVIWFQKNVASGGPSWEVPLGRRDSRDASISGSNNNIPAPNNTFQTILTKFHLHGLDLVDLVALSGSHTIGNARCTTFRQRLYSQISGNGKPDSTLDQYYAAALRNRCPRSGGDQNLFFLDYATPYKFDNTYFKNLLAYKGLLSSDQILLTDQESAELVKSYAESNDIFFEQFAKSMIKMGNISPLTNSRGEIRENCRKINS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00676 349 Gene3D Peroxidase, domain 2 185 327 - -
Vimu11g00676 349 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Vimu11g00676 349 Gene3D - 33 348 - -
Vimu11g00676 349 PRINTS Haem peroxidase superfamily signature 207 222 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Haem peroxidase superfamily signature 268 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 ProSiteProfiles Plant heme peroxidase family profile. 29 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 SUPERFAMILY Heme-dependent peroxidases 30 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 FunFam Peroxidase 185 327 - -
Vimu11g00676 349 ProSitePatterns Peroxidases proximal heme-ligand signature. 207 217 IPR019793 -
Vimu11g00676 349 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Plant peroxidase signature 322 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Plant peroxidase signature 206 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Plant peroxidase signature 282 299 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Plant peroxidase signature 266 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 CDD secretory_peroxidase 29 347 IPR033905 GO:0004601|GO:0042744
Vimu11g00676 349 Pfam Peroxidase 47 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vimu11g00676 349 PANTHER PEROXIDASE 72-RELATED 29 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00676 Vimu-Chr11 7213341 7214988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00676 1 348 Peroxidase AT5G66390 69.034 4.19e-178 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00676 K00430 - gmx:100810663 565.844