Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00664 ATGTTGAATCTGTTGATGAGAGAAGAGGTACTATTGGTAGTGCAGAACTGTTACCACATAATCTTGGTCGCATTATTCACTATAGGAGTAACATATTTCGCTTCAAAAGCATGGAAGAGAGCTACAACAAACCATAGAGAAGAGATTCCTGGAAGATTGGGACTGCCTTTTATTGGGGAAACTCTTGCTTTTCTTTCAGCCACTAATAGCACAAGGGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGCTATTTGGGAAGATTCACATATTTATTCCTAATCCTGAAGGAGCAAGGACAATATTTGCCAATGACTTTGTACTGTTCAACAAGGGTTACGTGAAATCAATGGCAGATGCCGTGGGAAAGAAAAGCTTATTATGTGTACCCGTTGAGAGTCACAAAAGAATAAGGCGTCTTCTATCAGAACCATTTTCCATGACTTCCCTATCCGCTTTTGTCACCAAATTTGACAAACTATTGTGTGGAAGGCTACAAAAGCTAGAAGAAAGCGGGAAAAGTTTCAAAGTGTTGAACTTTTGTATGAAGATGACATTCGATGCAATGTGTGATATGCTGATGAGCATCACGGAGGATTCATTACTACGACAGATCGAAGAAGACTGCAACGCCGTCTCCGACGCCATGTTATCCATTCCCATCATGATTCCTGGTACCAGATACTATAAAGGCATCACGGCTCGTAAAAGGCTCATGGAGACCTTCAGAGAGATCATTGCCAGACGTAGGAGGGGAGAAGAAACTCGAGAGGACTTTCTTCAGTCCATGTTGCAAAGAGACTCACTCCCACCCAGTGAAAAACTTGATGACTCGGAGATAATGGATAACCTGCTGACATTGATAATTGCTGGACAAACGACCACGGCAGCGGCAATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGAAGCACAGGACATACTCAGGGAAGAACAGTTATCTATAACCAATATGAAACCAGACGGAGCTTCACTTAACCATGAAGATCTAAACAACATACGTTATGGTTTGAAGGTTGTCAAGGAAACATTGAGAATTTCCAATGTCCTGCTATGGTTTCCTCGTGTCGCACTTCAAGACTGCACGATCGAAGTTTTTCTGGCCTTCTATGACTATGTTACTAACCATACAGGGTATGACATAAAGAAAGGTTGGCATGTTAACATCGATGCAACTTACATACATCACGACTCTGATTTGTACAATGATCCGTTGAAATTCAACCCACAAAGATTTGATGAACATCAAAAGCCATACAGTTTCATACCTTTCGGATCAGGGCCTAGGACATGCCTTGGGATCAATATGGCAAAAGTGACAATGTTAGTCTTTTTACACAGGCTTGCTGGAGGTTATACGTGGACCCTTGATGATTTAGACACTTGCTTAGAAAAGAAGGCACACATACCTAGGCTAAGGAGCGTCCTTGAGCAAAACTATCCTAGAGTCATAAAAGAAGGTCATGGAGATTTACAAGAAAGGGAAGGCTTGATAAGAACAAAGCAGCAGAGAGTAGTCTATATCTGCAGATTTAACATCACATGA 1596 0.416 MLNLLMREEVLLVVQNCYHIILVALFTIGVTYFASKAWKRATTNHREEIPGRLGLPFIGETLAFLSATNSTRGCYDFVRLRRLWNGRWFKTRLFGKIHIFIPNPEGARTIFANDFVLFNKGYVKSMADAVGKKSLLCVPVESHKRIRRLLSEPFSMTSLSAFVTKFDKLLCGRLQKLEESGKSFKVLNFCMKMTFDAMCDMLMSITEDSLLRQIEEDCNAVSDAMLSIPIMIPGTRYYKGITARKRLMETFREIIARRRRGEETREDFLQSMLQRDSLPPSEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNREAQDILREEQLSITNMKPDGASLNHEDLNNIRYGLKVVKETLRISNVLLWFPRVALQDCTIEVFLAFYDYVTNHTGYDIKKGWHVNIDATYIHHDSDLYNDPLKFNPQRFDEHQKPYSFIPFGSGPRTCLGINMAKVTMLVFLHRLAGGYTWTLDDLDTCLEKKAHIPRLRSVLEQNYPRVIKEGHGDLQEREGLIRTKQQRVVYICRFNIT 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00664 531 PANTHER CYTOCHROME P450 26 49 472 - -
Vimu11g00664 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Vimu11g00664 531 Pfam Cytochrome P450 54 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 FunFam cytochrome P450 90A1-like isoform X1 39 498 - -
Vimu11g00664 531 SUPERFAMILY Cytochrome P450 47 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 Gene3D Cytochrome P450 38 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00664 531 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00664 Vimu-Chr11 7104528 7108958 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00664 50 469 Cytochrome P450 AT1G19630 45.647 5.52e-121 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00664 - - gmx:100789430 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00664 11 7104528 7108958 Vimu11g00664 11 7104528 7108958 ECH