Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00617 GAGAGAGAGAGAATCAGAAGAGAAGAAAGTAGAAAGAATCAGACAGGCTACTCCATGTCAGACTCAAATCTGACTTTCTGTTTTCTTTCTTCCATCCTTGCTCTTATAGTCATCACCTTCATTTTCACCAAAAGAAAGAAACCAACCCTTAATCTTCCCCCTGGCCATACGGGGTGGCCCCTCCTTGGGGAAACCATAGGGTATTTGAGGACTTACCAAGCTGTTACACTGGGAGAGTTTATGGAGAAGCACATAGCAAGGTCAAACTTGTTTGGGGAGCCAGCCATAGTGTCAGCAGATGCAGGGCTGAATAGGTTCATAATGCAGAACGAAGGGAAGTTGTTCGAGGCTAGTTATCCTAAGAGCCTCGGTGGAGTACTTGGAAAATGGTCTATGTTGGTCATAGTAGGAGACATGCATAGAGACATGAGGAACATATCACTCAACTTTCTCAGCTATTCCAGGGTCCGAAATCATCTATTCAAAGACATCGATTACCATGCCCGTCGTGTTATTTTCTCCTGGAAACATAATTCTACATTATCAGCTCAAAAAGAAGCAAGAAGGTTCACCTTCAATTTAATGGCGAAACAAATCATGAGTTTGGACCCTGGTAAACCGGAGACAGAACAATTGGAGACAGAATACGTCTCTTTCATGAAGGGTGTTGTATCTCTTGTTCCTTTGAATTTGCCCGGAACAGCATACAGAAAGGCATTAAAGGCTAGGTCCACCATTCTGAAGTTCATAGAGGCGAAAATGGAAGAGAGGGCGAAGAGGGTCCAGAAGGGTGAGGCAGTGGAGGAAGAAAACGATCTTCTAAACTGGGTTGTGACTCATACAAACCTTTCAAATGAGCAAATACTTGACTTGATATTGAGCTTGCTCTTTGGCGGCCATGAAACCTCGTCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCGGGTTGTCCTCCAGCTATGCAACAATTGAGGGAGGAACACGTGGAAATAGTCACTTCCAAGAAGAAGACAGGGGAGGTTGAATTGACTTGGAATGATTACAAAAAAATGGAGTTTACTCACTGTGTTTTGAACGAAACACTTCGACTAGGGAATGTTGTGAGGTATCTTCACAGGAAGGCTATTAAGGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTTCTTCCGGTGATTTCAGCTGCACATTTCGATCCTCAACACTTTGACCAACCTCACCAATTCAATCCATGGAGATGGCAGGGGAGTAATGGTAAAGCTGATAATAACTTCATGCCATTTGGAGGAGGATCAAGGTATTGTGCAGGGTCAGAGTTAGCGAAGGTGGAAATGGCGGTGTTCATCCACCATCTGATACTGAACTACGACTGGGAACTTCTGGAAGGTGATGAACCTTTTGTATACCCTTATGTGGATTTCCCCAAAGGTCTACCCATCAAAGTCCAAGCTACATCATCCATCTAG 1476 0.4411 ERERIRREESRKNQTGYSMSDSNLTFCFLSSILALIVITFIFTKRKKPTLNLPPGHTGWPLLGETIGYLRTYQAVTLGEFMEKHIARSNLFGEPAIVSADAGLNRFIMQNEGKLFEASYPKSLGGVLGKWSMLVIVGDMHRDMRNISLNFLSYSRVRNHLFKDIDYHARRVIFSWKHNSTLSAQKEARRFTFNLMAKQIMSLDPGKPETEQLETEYVSFMKGVVSLVPLNLPGTAYRKALKARSTILKFIEAKMEERAKRVQKGEAVEEENDLLNWVVTHTNLSNEQILDLILSLLFGGHETSSVAIALAIYFLPGCPPAMQQLREEHVEIVTSKKKTGEVELTWNDYKKMEFTHCVLNETLRLGNVVRYLHRKAIKDVRYKGYDIPRGWKVLPVISAAHFDPQHFDQPHQFNPWRWQGSNGKADNNFMPFGGGSRYCAGSELAKVEMAVFIHHLILNYDWELLEGDEPFVYPYVDFPKGLPIKVQATSSI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00617 491 FunFam Cytochrome P450 90B1 42 487 - -
Vimu11g00617 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Vimu11g00617 491 SUPERFAMILY Cytochrome P450 50 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 Pfam Cytochrome P450 53 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 CDD CYP90-like 81 485 - -
Vimu11g00617 491 Gene3D Cytochrome P450 41 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu11g00617 491 PANTHER CYTOCHROME P450 26 48 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00617 Vimu-Chr11 6663095 6666811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00617 44 423 Cytochrome P450 AT3G50660 65.602 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00617 K09587 - gmx:100800210 736.873