Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00607 ATGAGAGTTCCCTCATCCCAACAGCCCAATAACCATTCTCCCAATCCAAACCTCCTCCTCCACACCACTACCACCACCAACACCACCAACCCCACCTTCACCTACGAACCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGTCCCGAAAAGAAACCAACTGTCCCAAAGCCAGAACCTCAACATAACCTCACCACCACAACCAATACCAACAACACCCTAGACCTGGACGATCATGTCTTGCCAAATTCCGATTGGTGGGAGTCCATCATGAAGGACCTAGCCTTACCCGAAGATTCTCCCACAACCCTCTCTAAGCCTAACAACATCAATCCATGCATCCCTGATTTTCCACCTTCTCATGACCCACCCTTTGATCACCCTCCTGACTTCACCTCGCTTTCAGAAATTTACAACCAAAACATCCCCTACAACTACACCACCACCAACCCTTTGGACCATTCCTTTCACGACCTCAACCACCACCACCACAACCCCACCATCAACGTTAACAACTGGGACTTCATCGAAGAGCTTATCCGCGCCGCCGATTGCTTCGACAGCAGTCACTTCCAACTCGCTCAAGCCATACTCGAACGCCTCAACACCCGCCTCATTCGCTCACCCATGGCCAAGCCGCTCCACCGAGCCGCGTTTCACTTCAAGGATGCTCTCCATTCCATTCTCTCCGGTTCCAACCGCGCGTCTTCCAACCGCCTCTCCTCCATGGCCGAGATTGTTCAAACCATCAAAACTTTCAAGGCCTTCTCGGGAATCTCTCCCATCCCAATGTTCTCTATCTTCACCACCAACCAGGCCTTGCTAGAAACCCTAAACGGATCCTCCTTCGTGCACGTCATCGATTTCGAAATCGGGCTCGGGATCCAATACGCCTCTCTCATGAAAGAGATCGCGGAGAAGGCCGCGGGCGCTTCCCTGCTCCTCCGCATCACCGCAGTCGTGCCAGAAGAGTACGCCGTGGAGAGCCGCCTCGTCCGCGAGAATCTCAACCAATTTGCGCATGACCTCGGGATCCGCGTTCAGGTGGACTTCGTCCCGCTTCGGACCTTCGAGGCGGTGTCATTCAAGTCGGTAAGGTTCGTCGACGGCGAGAAGATCGCGGTGCTGCTGTCGCCGGCGATCTTTTGCCGCCTCGGATCCGTTGGCGCCAGCGTCGGCGCGTTCCTCGCCGACGTGAAGAGGATGGCGCCCGGAGTGGTAGTGTTCGTGGACGGCGAGGGGTGGACGGAGGCTACCGCTGCAGCCTCTTTTCGGCGAGGCGTAGTGAACAGCTTGGAATTTTACTCCATGATGCTGGACTCGCTGGATGCGTCTGTGGCGGCCGGGGGAGGCGGCGAGTGGGTGAGGAGGATCGAGATGCTTCTACTGCGGCCGAAGATCTTCGCAGCAGTGGAAAGCGCAAGGAGGAGGTCACCAGCGTGGAGGGAGGCATTTTACGGCGCCGGAATGAGGCCAGTGCAGCTGAGCCAGTTCGCGGATTATCAAGCGGAGTGTTTGCTGGCGAAGGTGCAAATCAGAGGGTTCCACGTGGAAAAACGACATGCCGAATTGGTGCTCTGCTGGCACGAACGAGCCATGGTTGCCACATCAGCTTGGCGGTGCTAG 1626 0.567 MRVPSSQQPNNHSPNPNLLLHTTTTTNTTNPTFTYEPTSVLDLCRSPSPEKKPTVPKPEPQHNLTTTTNTNNTLDLDDHVLPNSDWWESIMKDLALPEDSPTTLSKPNNINPCIPDFPPSHDPPFDHPPDFTSLSEIYNQNIPYNYTTTNPLDHSFHDLNHHHHNPTINVNNWDFIEELIRAADCFDSSHFQLAQAILERLNTRLIRSPMAKPLHRAAFHFKDALHSILSGSNRASSNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAAGASLLLRITAVVPEEYAVESRLVRENLNQFAHDLGIRVQVDFVPLRTFEAVSFKSVRFVDGEKIAVLLSPAIFCRLGSVGASVGAFLADVKRMAPGVVVFVDGEGWTEATAAASFRRGVVNSLEFYSMMLDSLDASVAAGGGGEWVRRIEMLLLRPKIFAAVESARRRSPAWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVEKRHAELVLCWHERAMVATSAWRC 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00607 541 Pfam GRAS domain family 176 540 IPR005202 -
Vimu11g00607 541 MobiDBLite consensus disorder prediction 1 76 - -
Vimu11g00607 541 MobiDBLite consensus disorder prediction 1 41 - -
Vimu11g00607 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 165 535 IPR005202 -
Vimu11g00607 541 ProSiteProfiles GRAS family profile. 166 540 IPR005202 -
Vimu11g00607 541 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00607 Vimu-Chr11 6529509 6531134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00607 74 540 GRAS Transcription Factor Family AT4G36710 51.423 1.24e-156 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vimu11g00607 GRAS 1.9e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00607 - - gmx:100785004 837.795