Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00596 ATGTTCGTCCCTCTGACTCTCATTTCCCATTTCTCTCTCACTCTCGTTCGACCTGTTACACCGTCATTCACTCTCTTTCTCTTTTCCTCTCTTCTTCACTCTCTATCATTTGCAGTTCAATCAACCACAATTCTCCATTTGCGTACCCTCGAGAACGTTTCTCTCGTCTCCATCATCGAAGGCTCTCGTCACAGTTCTCAGTCGTCACAGTTCAAGCGAGAATTCGTTGATGTAGAGAAAGCTCTCGAGCAAATAACACATTTAATTTTAAAGGTTGATCTCATTTGTGCAACCAAGGGAACAGAAGCTTGGCTTAAGAAGTTGAAGTGGGAAGGACTTCAAAGTTTCTTGGAAAAAGACAGAACCCCCATCTATTGTGGAAGTGACAAAACCACAAAAGGGTTTTTCAAGTCATTCAAAAATCTGCATTTCTATTGGATCCTTGGAGCTGGTCATTATATACATTACCTGGAGAATGGTTCAGTTGAGATTTATAGTAGACAAGCAGAACGGAACACTGAGAAGTTTTCTGATGTTGCTACTGCAGTTTCAAGGAAAACCTTGGAGTCCGCAGAGAGGTTTTGGAGAAGATGGTTCCCTTGTATGGGTGGAGGGAAATGCTGA 624 0.4231 MFVPLTLISHFSLTLVRPVTPSFTLFLFSSLLHSLSFAVQSTTILHLRTLENVSLVSIIEGSRHSSQSSQFKREFVDVEKALEQITHLILKVDLICATKGTEAWLKKLKWEGLQSFLEKDRTPIYCGSDKTTKGFFKSFKNLHFYWILGAGHYIHYLENGSVEIYSRQAERNTEKFSDVATAVSRKTLESAERFWRRWFPCMGGGKC 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00596 207 Gene3D alpha/beta hydrolase 46 164 IPR029058 -
Vimu11g00596 207 Pfam Serine carboxypeptidase 91 154 IPR001563 GO:0004185|GO:0006508
Vimu11g00596 207 SUPERFAMILY alpha/beta-Hydrolases 92 156 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00596 Vimu-Chr11 6380605 6384537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00596 130 194 Core DNA Replication Machinery Family AT1G08130 43.662 3.92e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00596 K09646 - gmx:100794318 128.642