Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00589 ATGGACCAGGCCGAATTAACCACCGAACTGGTTCTGAGTAGGGACATTCCATGGGAGACCTATATGTCCACGAAGCTCATCTCAAGCACCAGCCTTCAGCTCTTAAGGCGCTATGATCACCGATCAGAGAGTCACAGAGCACAGTTGCTCGATGATGATGGTCCCTCATATGTTCGCGTGTTTGTTCGTGTTCTGCGTGATATTTTCAAGGAAGATACTGTAGAGTATGTTTTGGCACTGATAGATGAAATGCTTGCAGCAAACCCCAAGAGAGCAAGACTGTTTCATGACAGTACTCTTGCAGATGAAGATACTTATGAGCCTTTCCTAAAAACTAAAGGTCTGTCGCTTTTGATTGCATTTCTTTTACAGAAGATTAAATGCTATATTGCTCTGGAAAGGAAATTGGTTCATACAAGAGAAAAGTTAATTTCACCCTTTTCTGATAATAGTGTCAGGCCAAAAAATCAGAATGGTGTTGTGTCTAATGGAGAAGCATCAAATGGAAAGAAGCCATTTACCACTATTGATGATGTTTTGATAGGATTAGTAAAATGGCTTTGTGAACAGTTGAAGAAACCTTTTCATCCTACTCGTGGAGTCCCAACTGCTATCAATTGCCTAGCAACACTGCTTAAGGAACCTGTGGTTAGGTCTTCCTTTGTTCAGGCAGATGGGGTCAAGTTACTTGTGCCATTGATTTCACCAGCATCCACACAACAGTCCATTCAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCTTATCCTATTATGAGCCAGCAATTGAATATTTGGCTACTTCAAGGACCCTTCCTCGACTTATTGATGTTGTTAAGAGTTCTACAAAAGAGAAGGTGGTTAGAGTTATTGTGCTGACTCTTAAGAACTTGATGTCAAAAGGGACATTGGGTGCTCAGATGGTTGACCTTCAGCTGCCACAAGTTGTCCAGAGTTTAAAGGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTGAATTCTCTAGAAGAAGGGCTAAAGGATAATATTAAAAGACTAAGTTCTTTTGATATGTACAAGCAAGAAGTTCTCCTTGGCCATCTAGATTGGTCTCCCATGCACAAAGATCCCTTATTCTGGAGAGAAAATATAACCAACTTTGAAGAAAATGATTTCCAGATCCTAAGGGTCCTAATAACAATTTTGGACACTTCTAGTGATCCAAGGACTCTGGCAGTTGCTTGTTATGATCTTTCACAGTTTATCCAGCACCATCCTGCTGGACGGATAATTGTGACAGACCTCAAGGCCAAGGAACGGGTGATGAAGCTTATGAACCATGAAAATGCTGAAGTTACTAAGAATGCACTACTCTGTATCCAGCGGCTTTTCCTAGGTGCCAAGTATGCAAGTTTCTTGCAGGTTTAA 1413 0.4147 MDQAELTTELVLSRDIPWETYMSTKLISSTSLQLLRRYDHRSESHRAQLLDDDGPSYVRVFVRVLRDIFKEDTVEYVLALIDEMLAANPKRARLFHDSTLADEDTYEPFLKTKGLSLLIAFLLQKIKCYIALERKLVHTREKLISPFSDNSVRPKNQNGVVSNGEASNGKKPFTTIDDVLIGLVKWLCEQLKKPFHPTRGVPTAINCLATLLKEPVVRSSFVQADGVKLLVPLISPASTQQSIQLLYETCLCIWLLSYYEPAIEYLATSRTLPRLIDVVKSSTKEKVVRVIVLTLKNLMSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKRLSSFDMYKQEVLLGHLDWSPMHKDPLFWRENITNFEENDFQILRVLITILDTSSDPRTLAVACYDLSQFIQHHPAGRIIVTDLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00589 470 PIRSF V-ATP_synth_H 1 469 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vimu11g00589 470 FunFam V-type proton ATPase subunit H 361 462 - -
Vimu11g00589 470 Gene3D - 361 462 IPR038497 -
Vimu11g00589 470 Pfam V-ATPase subunit H 5 112 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vimu11g00589 470 Pfam V-ATPase subunit H 173 341 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vimu11g00589 470 Gene3D - 5 349 IPR011989 -
Vimu11g00589 470 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 416 423 IPR018506 GO:0020037
Vimu11g00589 470 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 469 IPR004908 GO:0000221|GO:0046961|GO:1902600
Vimu11g00589 470 Pfam V-ATPase subunit H 348 459 IPR011987 GO:0000221|GO:1902600
Vimu11g00589 470 SUPERFAMILY ARM repeat 9 460 IPR016024 -
Vimu11g00589 470 SMART arm_5 259 300 IPR000225 GO:0005515
Vimu11g00589 470 SMART arm_5 420 460 IPR000225 GO:0005515
Vimu11g00589 470 SMART arm_5 213 258 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00589 1 469 Primary Pumps ATPases(2) AT3G42050 73.134 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00589 K02144 - gmx:100788723 799.66