Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00528 ATGACTTGTTACTATTCTGATTGTGGAAAAACAGAGAAAAAGAAAGCAAGTTGGTGGTTATTCATGGACCAGACCACGCAAGGCGTTGTACTTCCAGCACTATTTCAAGAGAGATTGAGGATGGTATCGGAAATAGTGGAAAAAGGTAAAAGTAGTGATACCAACAAGCAGATACTGAGGTCAACGCTCAAGGATATGAACCCTGTGGTGCAAGAGATCAAGCAATACAATGAACACTTAAATCCACCCAGAGAAGAAATCAAAACCCTTATTTCAGAAAAAGATGCGAAAGAAGAGCTTGTGGGCAAATGCTTATCCAAAAAATTTTGTTTGGACAAGTGTCTCTCTTTCTTTCTGTGCAGATTTGGACACAAGAGGGATGGTTCATTTGCTGGTGGTGACAAGCAAGCTCTTGTGGCAAAAGATATTGAAGAGAAATTGTACAAAGTTAGGGAAATTCTTGAGCTTCTCAGCAAAGAGAATTTTGAGCAGAAGCTTGGTGGTGTTGGAGGACCTATCAGGTTTCCTTTTGGTGTTCCTGATAACCCAGATTTCACTGTTGGCTTGGATGTGCCGTTGAGCAAGTTGAAGATGGAGGTTCTCAGAGATGGTGTGTCTGTTATTATGCTGACTGGTTTGGGTGGAATGGGGAAAACCACTCTTGCTACAAAGCTCTGTTGGGATGAACAAGTCAAGGGTAAATTTGGGGGAAATATTTTATTTGTCACCGTCTCAAAAACAGCCAAGTTGAAGATTATTGTAGAGAGATTATTTCAACACTGTGGATATGAAGTACCCGATTTTCTAAGTGATGAAGATGCAGCTAATCAATTGGGACTTTTGCTAAGGCAAATTGGGAGAAGTTCAATGTTGTTGGTACTGGATGATGTTTGGCCTGGCTCAGAAGCCCTTGTCGAGAAATTTAAAGTCCAGATACCAGATTATAAAATTTTGGTGATTTCTAGGGTTGCATTGCTTAGATCGGACATGCAGTGTATCTTAAAACCACTTGTTCATGATGATGCAGAAACTCTTTTCCGACATTATACGCAGTTGGAAGAAAGTGGTTCAAGTATTCCTGATGAAGTCATCCAAAAGGTTGTGAGAAACTGCAAGGGTTTACCGCTTGCCATCAAAGTAGTTGGGAGATCACTCTGTAATCAGCGTTCTGAATTGTGGCTACAGATGATGGAGGAATTGTCCCAAGGTCGTTCTATACTTGATTCTAATGTTGAACTAATTACGTGCCTCCAAAAGATATTGGATGTTTTGGAAGATAATCTTGTCATCAAAGGGTGCTTCATGGACCTAGGTTTATTTCCTGAAGAACAAAGAATTCCTGTTACTGCTCTCATTGACATGTGGGCAGAGTTATATAGACTAGATGATGACGGCAAAGAGGCAATGACCATCATTAACAAATTAGACTCCATGAATCTGGCTAATGTCATGGTAGCAAGGAAAAATGCTACTAACACAGACAGTTACTACTACAATAACCACTTCATCGTTCTTCATGACCTTCTGAGAGAGCTTGCAATTTATCAGTGCTCCCAGGAACCAATGGAACAGAGAAAAAGATTGATTATTGAGATAAATCAAAATAAACATGGGGAGAAGACAAAATTTCTTAGCTGGTGTGTTAAACAGAAGCCCCAACAAGTCACTGCCCACACATTGTCTATATCAACTGATGAAAATTGCCCTTCAGATTGGCCCCAAATGCATCTACCTCAAGTTGAGGTTCTAATTTTTAATCTTCAAACTAAGCAGTATTCCTTTCCAAATTGCATGGAAGGTATGAACAAACTAAAAGTTCTGATAGTCACAAATTACAGTTACTATCCTTCTGAAATCAACAACTTTGAGCTACTTGGCTCTTCATCCAACCTGAGAAGAATCAGATTAGAGCGGATTTCTGTTCCTTCCTTTGTTGCAATGAAGAATCTTAAAAAGTTATCCCTCTACTTTTGTAATACGAAACAAGCATTTCAAAACAAGGACCTGCTAATTTCATACGCTTTTCCAAATCTTGAAGATTTGAATATTGACTATTGCAAGGATATGGTGGGATTCCCTAAGGGGCTCTGTGATATCATCTCCCTGAAGAAGCTCAGTATTACTAATTGCCACAAACTCTCTGCATTGCCGCAAGATATTGGAAAATTGGAGAATTTGGAACTCCTAAGGCTCAGTTCTTGTACCGATTTAGAAGGGATACCTGATTCTATTGGAAGACTTTCAAATCTACGACTTCTTGACATCTCAAATTGCATAAGCCTTCCGAATTTACCGGATGACTTTGGTAATCTGTCTAATCTGCAAAATCTCTACATGACAAGTTGTGCAAGGTGTGAATTACCATTGTCAGTCACTAATCTTGGGAATTTAAAGGTGGTGATATGCGATGAAGAGACAGCAGCTTCTTGGGAAAATTTCAAACCAATGCTTCCCAATTTAAGGATAGATGTTTCTCAAGTTGATGTTAACTTGAATTGGCTTCATACAACTTTCTCCTAA 2520 0.3921 MTCYYSDCGKTEKKKASWWLFMDQTTQGVVLPALFQERLRMVSEIVEKGKSSDTNKQILRSTLKDMNPVVQEIKQYNEHLNPPREEIKTLISEKDAKEELVGKCLSKKFCLDKCLSFFLCRFGHKRDGSFAGGDKQALVAKDIEEKLYKVREILELLSKENFEQKLGGVGGPIRFPFGVPDNPDFTVGLDVPLSKLKMEVLRDGVSVIMLTGLGGMGKTTLATKLCWDEQVKGKFGGNILFVTVSKTAKLKIIVERLFQHCGYEVPDFLSDEDAANQLGLLLRQIGRSSMLLVLDDVWPGSEALVEKFKVQIPDYKILVISRVALLRSDMQCILKPLVHDDAETLFRHYTQLEESGSSIPDEVIQKVVRNCKGLPLAIKVVGRSLCNQRSELWLQMMEELSQGRSILDSNVELITCLQKILDVLEDNLVIKGCFMDLGLFPEEQRIPVTALIDMWAELYRLDDDGKEAMTIINKLDSMNLANVMVARKNATNTDSYYYNNHFIVLHDLLRELAIYQCSQEPMEQRKRLIIEINQNKHGEKTKFLSWCVKQKPQQVTAHTLSISTDENCPSDWPQMHLPQVEVLIFNLQTKQYSFPNCMEGMNKLKVLIVTNYSYYPSEINNFELLGSSSNLRRIRLERISVPSFVAMKNLKKLSLYFCNTKQAFQNKDLLISYAFPNLEDLNIDYCKDMVGFPKGLCDIISLKKLSITNCHKLSALPQDIGKLENLELLRLSSCTDLEGIPDSIGRLSNLRLLDISNCISLPNLPDDFGNLSNLQNLYMTSCARCELPLSVTNLGNLKVVICDEETAASWENFKPMLPNLRIDVSQVDVNLNWLHTTFS 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00528 839 Gene3D - 173 332 IPR027417 -
Vimu11g00528 839 Pfam NB-ARC domain 202 404 IPR002182 GO:0043531
Vimu11g00528 839 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 26 834 IPR039203 GO:0050832
Vimu11g00528 839 SUPERFAMILY RNI-like 589 802 - -
Vimu11g00528 839 PRINTS Disease resistance protein signature 371 385 - -
Vimu11g00528 839 PRINTS Disease resistance protein signature 207 222 - -
Vimu11g00528 839 PRINTS Disease resistance protein signature 284 298 - -
Vimu11g00528 839 PRINTS Disease resistance protein signature 745 761 - -
Vimu11g00528 839 Gene3D - 337 420 IPR042197 -
Vimu11g00528 839 Gene3D - 421 514 IPR036388 -
Vimu11g00528 839 Coils Coil 140 160 - -
Vimu11g00528 839 Gene3D Ribonuclease Inhibitor 530 819 IPR032675 -
Vimu11g00528 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 173 437 IPR027417 -
Vimu11g00528 839 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 28 106 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00528 Vimu-Chr11 5627640 5631466 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00528 588 784 WRKY Transcription Factor Family AT4G12020 26.267 3.22e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00528 - - gmx:100809435 1249.96