Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00486 ATGGATATGGCTCAGGTGAAGACACGAGCTCGAACTGCATTGGGCGTTGGAGCTTCTGCGACTTCACCGAAGAGAAGGAAAATCGCCATTAACAACAACAGCAACAACATCTCACCGTCCTCCTGCGTCCAACTCAAGAGTTTGAGTAATACAACCTCGCGGGAGTCGGAGGAACGCTGTTCCGGTGAATCTCCGGCGTCGTGTTGCTCCAGCAACGGATCATTCGACGAAAACCGAATCATCAAATTCTCAGATCTGGAGGTAGAGAACGCTCAAGTTGAAACGTCGACGTGCAACTTTGGTGAACAGCAAATGAGGAGGGAGATGAGTCTCTCGAGTGACCTTCGAATTACGAATTCGCAGGAGGTGAATTCAGCGGAGAAGAAGCCAACGATGCAGACCAAAACCAAACCTCGATGTTACGTTCCACCAGCGCCCCAGAAAATGCCAGCGGAGTCAGAGCTCGAAGAATTCTTCGCCGCCGCTGAGAAAGACATTCAGAAACGCTTCTCAGAAAAGTATAATTATGATATTGTGAAGGACATGCCCTTGGAAGGACGATACGAATACGGAGAAGCTAGTTCTGTGCGGAATTCTGTAAATTCCGTTGGTGAGGACTGTAGCGCAAATGGTTCCTATAAGGCTATTACAAAATTGTAG 660 0.4833 MDMAQVKTRARTALGVGASATSPKRRKIAINNNSNNISPSSCVQLKSLSNTTSRESEERCSGESPASCCSSNGSFDENRIIKFSDLEVENAQVETSTCNFGEQQMRREMSLSSDLRITNSQEVNSAEKKPTMQTKTKPRCYVPPAPQKMPAESELEEFFAAAEKDIQKRFSEKYNYDIVKDMPLEGRYEYGEASSVRNSVNSVGEDCSANGSYKAITKL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00486 219 PIRSF CKI_KRP_plant 1 191 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vimu11g00486 219 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 4 193 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vimu11g00486 219 MobiDBLite consensus disorder prediction 1 33 - -
Vimu11g00486 219 Gene3D p27 145 213 IPR044898 -
Vimu11g00486 219 Pfam Cyclin-dependent kinase inhibitor 150 191 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00486 Vimu-Chr11 5213570 5215114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00486 81 190 Core Cell Cycle Gene Families AT1G49620 40.351 1.05e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00486 - - ccaj:109818608 243.047