Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00477 ATGAACATTCGTGGACGAATATGGACATCCATTGAAGGCCAAACGGATCTCCTATATTTGTGTGTTGCAGCTTGTTCAAATGGATTTTGCATTCCCGTTCGCGAGCAATTTAACTCTTCTCCCTACCACTTATGTTATAGCTCTGGCAGCAATCTCCCTCCACAACCGAATGAAACATCCTTTTCTAAGAATCACACAGCTCTTAATCAGTCCTACAAGGCCCACAAAAGTGGCATCAAGAAGCCCAAGAGGCATCGCCACACTTCCACCAAAGTTGTTCAAATGGATTTTGCATTCCCGTTCGCGAGCAATTTAACTCTTCTCCCTACCACTTATGTTATAGCTCTGGCAGCAATCTCCCTCCACAACCGGTAA 375 0.448 MNIRGRIWTSIEGQTDLLYLCVAACSNGFCIPVREQFNSSPYHLCYSSGSNLPPQPNETSFSKNHTALNQSYKAHKSGIKKPKRHRHTSTKVVQMDFAFPFASNLTLLPTTYVIALAAISLHNR 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00477 124 Gene3D - 60 106 - -
Vimu11g00477 124 Pfam Ribosomal L29e protein family 62 97 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vimu11g00477 124 PANTHER 60S RIBOSOMAL PROTEIN L29 62 97 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00477 Vimu-Chr11 5139360 5143467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00477 62 97 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 69.444 7.12e-11 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00477 K02905 - mnt:21412468 64.3142