Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00449 ATGGGTAGCTATAGCATACTACACCTGTCCAAAGGGAAGATACCTTTCCTGCTAAAAAAGGAAAAGCAGAACAATAATTTCAAGGCTGGAGGAAGCGTGAGCTATAGTAAGAGATTCAGCAGAGACATGGCTAATGAAGATGAACCCAAAAACCACCTCTTGGGCATAAGAAATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTCGGAACTTAATGGCTACACCACCAGACGAAGGACAATTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTGTACACCGGTTACTCTCTACTTTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGATCTTGGCTTTGGACTTGAACCGCGAATTCTATGAATTGGGTTTGCCCATCATTGAAAGAGCTGGTGTGGCTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACCAGCTGCTTAAAGATGAAAATAAGAAGGAGCAGTTCGATTTTGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTGGTGAAGGTGGGAGGTATGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCCGTGCCTCCTGATGCACCGATGATGGATTACGTTAAACCTCTTCGTGGCTATGTGATGGAGTTCAACAAGTACCTGGCACAAGATACAAGGATTGAGATTTGCCAGCTCCCAGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 867 0.4556 MGSYSILHLSKGKIPFLLKKEKQNNNFKAGGSVSYSKRFSRDMANEDEPKNHLLGIRNLSHKTLLQSDALYQYILETSVYPREHECLKELREMTEKHPRNLMATPPDEGQFLSMLIKLINAKNTLEIGVYTGYSLLSTALALPPDGKILALDLNREFYELGLPIIERAGVAHKIDFREGPALPFLDQLLKDENKKEQFDFVFVDADKNNYLNYHKRVIDLVKVGGMIGYDNTLWAGSVAVPPDAPMMDYVKPLRGYVMEFNKYLAQDTRIEICQLPVGDGITLCRRII 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00449 288 FunFam Caffeoyl-CoA O-methyltransferase 1 56 288 - -
Vimu11g00449 288 Gene3D Vaccinia Virus protein VP39 53 288 IPR029063 -
Vimu11g00449 288 Pfam O-methyltransferase 76 287 IPR002935 GO:0008171
Vimu11g00449 288 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 286 IPR029063 -
Vimu11g00449 288 PANTHER O-METHYLTRANSFERASE-RELATED 60 287 - -
Vimu11g00449 288 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 63 287 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00449 Vimu-Chr11 4818550 4819842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00449 46 287 Monolignol Biosynthesis Gene Families AT4G34050 72.314 4.66e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00449 K00588 - gmx:100305498 441.425