Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00448 ATGGCTAATGAAGATGAACCCAAAAACCACCTCTTGGGCATAAGAAATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGAAACCAGTGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACACCCTCGGAACTTAATGGCTACACCACCAGACGAAGGACAATTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTGTACACCGGTTACTCTCTACTTTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGATCTTGGCTTTGGACTTGAACCGCGAATTCTATGAATTGGGTTTGCCCATCATTGAAAGAGCTGGTGTGGCTCACAAGATCGACTTCAGAGAAGGACCTGCTCTTCCTTTTCTTGACCAGCTGCTTAAAGATGAAAATAAGAAGGAGCAGTTCGATTTTGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGAGTAATTGATCTGGTGAAGGTGGGAGGTATGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCCGTGCCTCCTGATGCACCGATGATGGATTACGTTAAACCTCTTCGTGGCTATGTGATGGAGTTCAACAAGTACCTGGCACAAGATACAAGGATTGAGATTTGCCAGCTCCCAGTGGTTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4602 MANEDEPKNHLLGIRNLSHKTLLQSDALYQYILETSVYPREHECLKELREMTEKHPRNLMATPPDEGQFLSMLIKLINAKNTLEIGVYTGYSLLSTALALPPDGKILALDLNREFYELGLPIIERAGVAHKIDFREGPALPFLDQLLKDENKKEQFDFVFVDADKNNYLNYHKRVIDLVKVGGMIGYDNTLWAGSVAVPPDAPMMDYVKPLRGYVMEFNKYLAQDTRIEICQLPVVDGITLCRRII 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00448 246 PANTHER O-METHYLTRANSFERASE-RELATED 18 245 - -
Vimu11g00448 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
Vimu11g00448 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Vimu11g00448 246 FunFam Caffeoyl-CoA O-methyltransferase 1 14 246 - -
Vimu11g00448 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Vimu11g00448 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00448 Vimu-Chr11 4800792 4801958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00448 4 245 Monolignol Biosynthesis Gene Families AT4G34050 71.901 5.47e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00448 K00588 - gmx:100305498 437.958