Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00436 ATGGAACCATCGGAGAATTGCTCTGTTAAAGTCGCTCTTCACATTCGTCCTCTCATTGCTGATGAACGACAGCAAGGTTGCATTGAATGTGTTTCCGTCACGCCTGGGAAGCCTCAGGTTCAGATTGGATCGCATTCCTTTACATTTGACCATGTTTATGGAAATGGTGGGTCTCCTTCGGTTGACATGTTTGAGGAATGCGTTGCTCCATTGGTTGATGGCTTATTCCTAGGATACAATGCTACAGTACTTGCATATGGTCAGACAGGATCTGGGAAAACGTATACCATGGGAACTGGCTACAATGACAATTGTCGGAGCGGATTAATTCCGCAGGTTATGAGTGCCTTATTCAACAAAGTTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCGAGTTTCCTTCATTGAGGAAATGTTTCCACGAACTCTTATTCTTGTCGGGGACTTAATTATGCATTTGATTTTGAAGATTTTAAAGGAAGAGGTCAGGGACCTGTTGGATGCGGTATCTTTGGGCAAATCAGACACCTCTAACTCTAATGGCCATTCTGGAAAAATAACTGTTCCTGGGAAGTCACCAATACAAATTCGTGAAACAGCAAATGGAATAATAACACTGGCAGGAATAACTGAAATTGCTGTAAGTACATTACATGAGATGTCTGCATACTTGGAACAGGGTTCTTTAAGTAGGGCAACGGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATTTTCACAATTACATTAGAACAAATGCACAAGCTCCATTCTGTTTCTACCACCAATGACTCTTCGGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGCGTTCGTTTGAAAGAAGGAATACACATCAACAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCACTAGGTGATGAGAAAAAGCGAAAGGAAGGTGTGCATGTTCCTTATCGTGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATAAGTCCCGCTGATGTCAATGCCGAGGAAACTCTCAACACTCTCAAGTATGCAAACCGTGCACGCAATATTCAAAATAAGCCTGTTGTTAATCGAGATTTAATATCCAATGAGATGCAGCAAATGCGCCAACAGTTGAAGTACTTACAGGCTGAACTCTGTTCTCGGGGAGCAGCCCCCTCTGATGAAGTGCGGGTTCTTAAGGAAAGGATTGCTTGGCTCGAGGCCACTAATGAGGACCTTTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTCGTAGAGAGATGTGAAATTGATGAACCAGCAGATAGAAACATTTATCTTACGAAAGCTGATGGGCTTGAGAGGCGCTTTCAGAGCTCAGATTCATCTGACCATCCCATGGTTGGAAGTATATCTGGTGAAGATTCAAGGGAAACTGATGAAGCAGAAAAGGAGTTGGAGCATGTGCTATTACAAAATACCATGGATAAAGAAATGAATGAGTTGAATCAGCGGTTGGAGCAAAAAGAGTCTGAGATGAAGCTCATTGGAGTTGATACTGAAGCACTCAAACAACACTTCGGGAAGAAAATTGTGGAACTTGAGGAGGAGAAAAGAAAAGTACAGGAAGAGAGGGACAGATTATGGCATGAGGTAGAGAATCTTGCTAATAATTCAGACGGGCTAGCACACAAAACCCAAGATGTTCGTGGCCAAAAGTTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTGCAACTCTTAAAGCAAAAAGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAGTATATCAAGGCTCAGAAGGCCGGTTTTGATTTTGTTCAGTTGCAGCATAAAATGAAACAAGAGGCTGAACAATTTCGACAATGGAAGGCCTCTCGTGAGAAGGAGCTGCTCCAGTTGAAAAAAGAGGGAAGAAAGAATGAATACGAAAGACATAAACTTGAGGCTCTAAACCATCGCCAGAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACAAAAAGGCTAAAAGAACTGTTGGAAGCCCGTAAATCGTCTCCTCGTGACAACTCTGTTTATTCAAATGGACATCTACTTCCCGGGCTGGTCAATGAAAAATCCCTCCAGAAGTGGCTTGATCAGGAGGTGGAGGTCATGGTTCATGTGCATGAAGTTCGTACTGAATTTGACAAACAAAACCAAGTCCAAGCTGCACTGGAAGAAGAGTTGGCTTTACTAAAGCAGGATCAGTTTTCAGATGAGCTGAGTATTCCGAAAGGAAAGAGCAGATATTTGAGGCTGTTATCCATGGCGCCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTGCATGTCTTCAGTTGCTTTAAAAGCCATGGCTTCACAACTTACTGAGGCAGAAGAAAGGGAACGCACGTTAAACAACCGTGGTCGTTGGAATCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACTGCAGAAGCAAGCATCATCTTTATCAGGTGCCAATTGTTGGAAAAGAATATGGAACTTAAGGATTTGAAAGAGCAACTAAATGAACTTGTAGCACTATTACAACAAAGTGAAGCACAAAGAAAAGAACTTGTAAAGGAGGAAAAAATAAGGGAACAAGCTGTTGCCATTACATTGAATACTCCAGCATTGGAAAATTCACGGTCCTTGAAACACCTTGCTGATGAAATGAGTGATCCGTTGTCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACACCTGGAGTTGTTAATTGGTCCGTCACAGAGTCGGCTACATTTTTAAACGAAGCACGAAAGATGATACCCATTGGGGAGTTGTCAACTAAGAGGCTAGCTGCTATGGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAGACCATTATGAGGTCAAGGCCTCGAGCACAAGCTTTAATTAATGTGATGTGA 3186 0.4244 MEPSENCSVKVALHIRPLIADERQQGCIECVSVTPGKPQVQIGSHSFTFDHVYGNGGSPSVDMFEECVAPLVDGLFLGYNATVLAYGQTGSGKTYTMGTGYNDNCRSGLIPQVMSALFNKVETLKHQTEFQLRVSFIEEMFPRTLILVGDLIMHLILKILKEEVRDLLDAVSLGKSDTSNSNGHSGKITVPGKSPIQIRETANGIITLAGITEIAVSTLHEMSAYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSVSTTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQMRQQLKYLQAELCSRGAAPSDEVRVLKERIAWLEATNEDLYRELHEYRSRCAFVERCEIDEPADRNIYLTKADGLERRFQSSDSSDHPMVGSISGEDSRETDEAEKELEHVLLQNTMDKEMNELNQRLEQKESEMKLIGVDTEALKQHFGKKIVELEEEKRKVQEERDRLWHEVENLANNSDGLAHKTQDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKAGFDFVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNHRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLLPGLVNEKSLQKWLDQEVEVMVHVHEVRTEFDKQNQVQAALEEELALLKQDQFSDELSIPKGKSRYLRLLSMAPDAKVERIASLENMLCMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEASIIFIRCQLLEKNMELKDLKEQLNELVALLQQSEAQRKELVKEEKIREQAVAITLNTPALENSRSLKHLADEMSDPLSPMSLPAPKQLKFTPGVVNWSVTESATFLNEARKMIPIGELSTKRLAAMGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINVM 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00436 1061 Coils Coil 518 545 - -
Vimu11g00436 1061 Coils Coil 395 415 - -
Vimu11g00436 1061 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 418 IPR027417 -
Vimu11g00436 1061 ProSiteProfiles Kinesin motor domain profile. 8 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 CDD KISc_KIF4 7 388 - -
Vimu11g00436 1061 FunFam kinesin-like protein KIN-4A isoform X1 2 415 - -
Vimu11g00436 1061 Coils Coil 600 644 - -
Vimu11g00436 1061 PRINTS Kinesin heavy chain signature 283 301 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 PRINTS Kinesin heavy chain signature 238 255 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 PRINTS Kinesin heavy chain signature 337 358 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 Pfam Kinesin motor domain 35 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 SMART kinesin_4 6 395 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vimu11g00436 1061 MobiDBLite consensus disorder prediction 482 508 - -
Vimu11g00436 1061 Coils Coil 550 577 - -
Vimu11g00436 1061 Gene3D Kinesin motor domain 5 427 IPR036961 -
Vimu11g00436 1061 Coils Coil 889 923 - -
Vimu11g00436 1061 Coils Coil 834 854 - -
Vimu11g00436 1061 Coils Coil 427 454 - -
Vimu11g00436 1061 ProSitePatterns Kinesin motor domain signature. 282 293 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vimu11g00436 1061 Coils Coil 703 723 - -
Vimu11g00436 1061 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1050 IPR027640 GO:0003777|GO:0007018
Vimu11g00436 1061 Coils Coil 770 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00436 Vimu-Chr11 4600128 4611000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00436 9 420 Calmodulin-binding Proteins AT5G65930 33.413 9.91e-53 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00436 - - gmx:100790341 1815.43