Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00435 ATGTTGTGGGGGATGGTGGTTCGATTAGAGTTTGATTTGATGGATGACGTGTTGTTCTGCAAAGGGTTGTGTTTTCCATATGAGAGCACTGGCTTTCGTGGTTTGGTGGCCGATGTCGACAGTCACGGGGCTGGATTGTTTTTGTTTCTGTTTGGACTATTTTATTTTTGGTTGGGATGTGTGATATGTGATATGTTTGGACTATTTCAATGCCAGGTTGACTGCGGTTCAAGATCGGCGAGGGCGAAGCCTTTGCATTGGACATCATGCTTGAAAATAGCCGAAGATGTGGCACACGGACTTGCTTATATACATCAAGTTTCAACTCTAATTCATGGCAACCTGAAATCTTCTAACGTTCTTCTTGGGACGGGCTTTGAAGCCTGTATTACGGACTATTGCTTGTCCTTCTTTGCAGATTCTTCGTTCACTGAAGATCCCGATTCTGCGGCTTATAGAGCACCCGAGGCTCGCAACTCTAGCCGCAGAGCCACATCCAAGTCTGATGTTTATGCTTTTGGAGTGCTTCTACTAGAGCTTTTGACCGGTAAACACCCTTCCCAACAACCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAACAATGAGGGATGATGATGGCAGTGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGCGTTTCGATGGAGGATAATTCATTTACTGGGCTCTCTTAG 786 0.4656 MLWGMVVRLEFDLMDDVLFCKGLCFPYESTGFRGLVADVDSHGAGLFLFLFGLFYFWLGCVICDMFGLFQCQVDCGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSTLIHGNLKSSNVLLGTGFEACITDYCLSFFADSSFTEDPDSAAYRAPEARNSSRRATSKSDVYAFGVLLLELLTGKHPSQQPFLAPADLQDWVRTMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDNSFTGLS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00435 261 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 81 249 IPR046959 -
Vimu11g00435 261 Gene3D Transferase(Phosphotransferase) domain 1 76 258 - -
Vimu11g00435 261 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu11g00435 261 SUPERFAMILY Protein kinase-like (PK-like) 74 248 IPR011009 -
Vimu11g00435 261 Pfam Protein tyrosine and serine/threonine kinase 82 241 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00435 Vimu-Chr11 4592587 4593606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00435 76 255 Receptor kinase-like Gene Family AT3G50230 62.162 1.09e-72 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vimu11g00435 PK_Tyr_Ser-Thr 7.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00435 - - gmx:100783086 350.132