Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00413 ATGGACCTGGCAGATATCCTGAGAGAGCACTTGCATCTGTGCTGTTTCTCCACCGCTTTATTTGTGGCTGCTGCCATTTGCCCTCATACCTTGCCCAAGCCACTCGTCAGGCCTTTTCAAAACTCTCTCATTTTCATCGCATTCCCTTTGGTTGGGGTAACAAAAACTTGGAAGGAATCGACTCTCAGCAAAATTGTTCAGTTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGTTGGATGAATTTGGTGAACGATATAGCCAAGTTGTTGTGGTGCTATCCATTGCAATTGCTGTTATTGGACCACTTCTATTTAAGTGGCCGTTCATTAGTACATCTGGAAGTGGAGGTAACATTGATTCATCTAGAGGATAG 387 0.4341 MDLADILREHLHLCCFSTALFVAAAICPHTLPKPLVRPFQNSLIFIAFPLVGVTKTWKESTLSKIVQLTEEAQSNKPKLQRWLDEFGERYSQVVVVLSIAIAVIGPLLFKWPFISTSGSGGNIDSSRG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00413 128 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 2 55 - -
Vimu11g00413 128 Pfam E1-E2 ATPase 51 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00413 3 56 Primary Pumps ATPases AT4G37270 51.852 1.29e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00413 K01534 - gmx:100776309 125.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00413 11 4378705 4398035 Vimu11g00413 11 4378705 4398035 ECH