Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00374 ATGGCTTCCATTTCCACAACTTTGCCTCTGCTTCTCTCGCTTCTTCTGTTACTCGCTCGCTACGATGCGGCTCAGCCGCCAGAACCGGAGAGGGGAACCTACATTGTACACGTGGCTAAATCGGAAATGCCCCAAAGCTTTGAACACCATACCGTGTGGTATGAGTCGTCGCTCAAATCCGTTTCTGACTCCGCCAAAATGATTTACACCTACGATAACGCCATCCATGGATATGCGACTAGATTAACTGTTGAGGAAGCGCGTTTGCTGGAAAGCCAAACTGGGATTCTTGCGGTGTTGCCGGAGACGAGGTATGAACTTCACACTACGAGGACGCCGCAGTTCCTGGGTCTCGACAAGAGCGCGGACATGTTCCCCGAGTCGAGCTCCGCGAGTGACGTCATCGTTGGAGTCCTTGACACTGGCGTTTGGCCTGAGAGCAAGAGCTTCGACGACACGGGGCTTGGACCTGTTCCCAGTAGCTGGAAAGGCGAGTGTGAAACGGGAACGAACTTCAGTGCTTCCAACTGCAACAGAAAGTTGATCGGAGCCAGGTTCTTTGCGAAGGGTTGCGAGGCCATGTTGGGTCCTATTAACGAGACTGAGGAGTCTAGATCCCCTCGCGACGATGACGGTCACGGCACTCACACAGCCAGCACAGCCGCGGGATCGGTGGTTTCCGGCGCAAGTCTTTTCGGTTACGCATCCGGGACGGCGCGTGGGATGGCGACGCGCGCGAGAGTCGCTGCTTACAAGGTTTGCTGGAAGGGTGGGTGTTTCAGTTCAGATATTCTTGCGGCAATTGATAGCGCGATACAAGACAACGTTAATGTGTTGTCGTTGTCGCTTGGTGGTGGAATGGCTGATTATTACAGAGACAGTGTCGCTATTGGAGCTTTTTCCGCGATGGAGAAAGGGATCTTAGTTTCTTGCTCCGCCGGGAACGCGGGTCCTAGTCCTTACAGTCTCTCAAACGTGGCACCATGGATTACGACCGTGGGTGCCGGCACTCTGGATCGTGACTTCCCTGCTTATGTTGCTCTAGGGAATGGACTTAACTTCTCCGGCGTGTCGCTATACCGAGGTAGCGCTTTACCTGATTCACCGTTACCGTTTGTTTACGCAGGCAATGCCAGCAACGCTACGAACGGGAACTTGTGCGTGACGGGAACCTTGTCACCCGAGAAAGTAGCCGGAAAGATTGTGTTATGTGACCGTGGATTAACTGCCAGGGTACAGAAAGGTTCAGTTGTGAAATCCGCCGGTGCCTTGGGCATGGTCTTGAGCAACACCGCCGCTAACGGCGAGGAGCTGGTGGCTGATGCTCATCTGTTGCCGGCGTCGGCGGTGGGGGAGAAAGCCGGCGACGCCATCAAGAAGTATTTGTTTTCCGAGGCTAAACCGACGGTGAGGATTTTGTTCGAGGGAACGAAGGTGGGGATTCAGCCATCGCCTGTGGTTGCAGCGTTTAGCTCGAGAGGTCCCAACTCGATCACGCCTCAGATCCTGAAACCAGATCTGATCGCGCCAGGTGTCAACATCTTGGCGGGGTGGTCAAAGGCCGTGGGTCCCACAGGTTTGCCCGTTGATAACAGGCGCGTGGATTTCAATATCATCTCTGGGACCTCGATGTCTTGTCCTCACGTGAGCGGATTAGCCGCTTTGATAAAATCGGTTCACCCAGAATGGAGCCCAGCCGCGGTTCGATCTGCTCTCATGACAACGGCTTACACCGTTTACAAAACCGGTGAGAAGTTGCAAGACAGTGCAACGGGAAAACCCTCCACGCCGTTTGATCACGGAGCGGGACACGTGGACCCGGTGGCTGCCCTCAATCCAGGGCTGGTGTATGATCTAACGGTGGATGATTATCTTGGTTTTCTCTGCGCGTTAAACTACTCTGCCTCTGAAATCAACACCCTGGCGAAGAGAAAATTCGAGTGCGACGCGGGCAAACGGTACAGTGTGAACGACCTGAACTACCCGTCGTTTGCGGTGTTGTTTGAATCAGGGAGTGGGTCCGGCGTGGTGAAGCACAGTCGAACGGTCACTAACGTGGGGCCCGCGGGAACGTACAAGGCTACGGTGACGTCAGACGCGGCTTCAGTGAAAATCTCGGTTGAACCGGAAGTGCTGAGTTTGAAGGAGAACGAGAAAAAATCGTTCGTGGTAAGTTTTTCATCCTCGGGTTCCACACAAGAGAGAGTGAATGCATTTGGACGCACGTGGTTGGGACCCCAATCTCAATTAACTGGGGTTGATAAGTTTGATCAAAGGTTCATCACTCACTCGAAGAGGGGTGTGTCTTGA 2310 0.539 MASISTTLPLLLSLLLLLARYDAAQPPEPERGTYIVHVAKSEMPQSFEHHTVWYESSLKSVSDSAKMIYTYDNAIHGYATRLTVEEARLLESQTGILAVLPETRYELHTTRTPQFLGLDKSADMFPESSSASDVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGECETGTNFSASNCNRKLIGARFFAKGCEAMLGPINETEESRSPRDDDGHGTHTASTAAGSVVSGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIDSAIQDNVNVLSLSLGGGMADYYRDSVAIGAFSAMEKGILVSCSAGNAGPSPYSLSNVAPWITTVGAGTLDRDFPAYVALGNGLNFSGVSLYRGSALPDSPLPFVYAGNASNATNGNLCVTGTLSPEKVAGKIVLCDRGLTARVQKGSVVKSAGALGMVLSNTAANGEELVADAHLLPASAVGEKAGDAIKKYLFSEAKPTVRILFEGTKVGIQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPVDNRRVDFNIISGTSMSCPHVSGLAALIKSVHPEWSPAAVRSALMTTAYTVYKTGEKLQDSATGKPSTPFDHGAGHVDPVAALNPGLVYDLTVDDYLGFLCALNYSASEINTLAKRKFECDAGKRYSVNDLNYPSFAVLFESGSGSGVVKHSRTVTNVGPAGTYKATVTSDAASVKISVEPEVLSLKENEKKSFVVSFSSSGSTQERVNAFGRTWLGPQSQLTGVDKFDQRFITHSKRGVS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00374 769 Pfam Fibronectin type-III domain 658 743 IPR041469 -
Vimu11g00374 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 108 IPR037045 -
Vimu11g00374 769 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Vimu11g00374 769 CDD Peptidases_S8_3 105 577 IPR034197 -
Vimu11g00374 769 FunFam Subtilisin-like protease SBT1.5 133 352 - -
Vimu11g00374 769 FunFam Subtilisin-like protease SBT1.9 25 108 - -
Vimu11g00374 769 MobiDBLite consensus disorder prediction 198 220 - -
Vimu11g00374 769 SUPERFAMILY Subtilisin-like 107 615 IPR036852 GO:0004252|GO:0006508
Vimu11g00374 769 Gene3D - 339 480 - -
Vimu11g00374 769 ProSiteProfiles Serine proteases, subtilase domain profile. 104 611 - -
Vimu11g00374 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 728 IPR045051 -
Vimu11g00374 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vimu11g00374 769 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Vimu11g00374 769 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Vimu11g00374 769 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vimu11g00374 769 Pfam PA domain 385 458 IPR003137 -
Vimu11g00374 769 Gene3D - 628 749 - -
Vimu11g00374 769 SUPERFAMILY PA domain 389 459 IPR046450 -
Vimu11g00374 769 CDD PA_subtilisin_like 345 472 - -
Vimu11g00374 769 FunFam subtilisin-like protease SBT1.5 339 479 - -
Vimu11g00374 769 Pfam Subtilase family 132 587 IPR000209 GO:0006508|GO:0008236
Vimu11g00374 769 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00374 Vimu-Chr11 4029788 4032119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00374 14 740 Subtilisin-like Serine Gene Family AT5G67360 72.291 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00374 - - gmx:100815413 1288.86